Aliases for LYPLA2P1 Gene

Aliases for LYPLA2P1 Gene

  • LYPLA2 Pseudogene 1 2 3 5
  • Lysophospholipase II Pseudogene 1 2 3
  • Lysophospholipase 2 Like 2 3
  • DJ570F3.6 2 3
  • APT 2 3
  • LYPLA2P1 5
  • LYPLA2L 3

External Ids for LYPLA2P1 Gene

Previous HGNC Symbols for LYPLA2P1 Gene

  • LYPLA2L

Previous GeneCards Identifiers for LYPLA2P1 Gene

  • GC06M033333
  • GC06M033379
  • GC06M033440
  • GC06Mf33405
  • GC06M033332
  • GC06M033074

Summaries for LYPLA2P1 Gene

GeneCards Summary for LYPLA2P1 Gene

LYPLA2P1 (LYPLA2 Pseudogene 1) is a Pseudogene.

Additional gene information for LYPLA2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LYPLA2P1 Gene

Genomics for LYPLA2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LYPLA2P1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LYPLA2P1 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the LYPLA2P1 gene promoter:
  • E2F
  • E2F-1
  • E2F-2
  • E2F-3a
  • E2F-4
  • E2F-5
  • E47
  • NF-kappaB
  • NF-kappaB1
  • NF-kappaB2

Genomic Locations for LYPLA2P1 Gene

Latest Assembly
chr6:33,364,737-33,366,362
(GRCh38/hg38)
Size:
1,626 bases
Orientation:
Minus strand

Previous Assembly
chr6:33,332,514-33,334,139
(GRCh37/hg19 by Entrez Gene)
Size:
1,626 bases
Orientation:
Minus strand

chr6:33,333,325-33,334,020
(GRCh37/hg19 by Ensembl)
Size:
696 bases
Orientation:
Minus strand

Alternative Locations (GRCh38/hg38)

  • chr6(ALT_REF_LOCI_1):4,669,391-4,671,016 (-)
  • chr6(ALT_REF_LOCI_2):4,776,222-4,777,847 (-)
  • chr6(ALT_REF_LOCI_5):4,800,675-4,802,300 (-)
  • chr6(ALT_REF_LOCI_6):4,559,159-4,560,784 (-)

Genomic View for LYPLA2P1 Gene

Genes around LYPLA2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LYPLA2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LYPLA2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LYPLA2P1 Gene

Proteins for LYPLA2P1 Gene

Post-translational modifications for LYPLA2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LYPLA2P1 Gene

Domains & Families for LYPLA2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LYPLA2P1 Gene

Function for LYPLA2P1 Gene

Phenotypes From GWAS Catalog for LYPLA2P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LYPLA2P1 Gene

Localization for LYPLA2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LYPLA2P1 Gene

Pathways & Interactions for LYPLA2P1 Gene

PathCards logo

SuperPathways for LYPLA2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LYPLA2P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LYPLA2P1 Gene

Drugs & Compounds for LYPLA2P1 Gene

No Compound Related Data Available

Transcripts for LYPLA2P1 Gene

mRNA/cDNA for LYPLA2P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LYPLA2P1 Gene

No ASD Table

Relevant External Links for LYPLA2P1 Gene

GeneLoc Exon Structure for
LYPLA2P1

Expression for LYPLA2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LYPLA2P1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LYPLA2P1

genes like me logo Genes that share expression patterns with LYPLA2P1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LYPLA2P1 Gene

Orthologs for LYPLA2P1 Gene

Evolution for LYPLA2P1 Gene

ENSEMBL:
Gene Tree for LYPLA2P1 (if available)
TreeFam:
Gene Tree for LYPLA2P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for LYPLA2P1

No data available for Orthologs for LYPLA2P1 Gene

Paralogs for LYPLA2P1 Gene

No data available for Paralogs for LYPLA2P1 Gene

Variants for LYPLA2P1 Gene

Additional Variant Information for LYPLA2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LYPLA2P1
Leiden Open Variation Database (LOVD)
LYPLA2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LYPLA2P1 Gene

Disorders for LYPLA2P1 Gene

Additional Disease Information for LYPLA2P1

Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for LYPLA2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LYPLA2P1 Gene

Publications for LYPLA2P1 Gene

  1. High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. (PMID: 19851445) Barcellos LF … Criswell LA (PLoS genetics 2009) 3 40
  2. Interactome analysis reveals that lncRNA HULC promotes aerobic glycolysis through LDHA and PKM2. (PMID: 32572027) Wang C … Zhang N (Nature communications 2020) 3
  3. Involvement of the Src homology 2-containing tyrosine phosphatase SHP-2 in growth hormone signaling. (PMID: 9442080) Kim SO … Frank SJ (The Journal of biological chemistry 1998) 3

Products for LYPLA2P1 Gene

Sources for LYPLA2P1 Gene