Aliases for LSM3P2 Gene

Aliases for LSM3P2 Gene

  • LSM3 Homolog, U6 Small Nuclear RNA And MRNA Degradation Associated Pseudogene 2 2 3 5
  • LSM3 U6 Small Nuclear RNA And MRNA Degradation Associated Pseudogene 2 2 3
  • LSM3 Pseudogene 2 2 3
  • LSM3 Homolog, U6 Small Nuclear RNA Associated (S. Cerevisiae) Pseudogene 2 2
  • LSM3 Homolog, U6 Small Nuclear RNA Associated Pseudogene 2 3

External Ids for LSM3P2 Gene

Previous GeneCards Identifiers for LSM3P2 Gene

  • GC12P094985

Summaries for LSM3P2 Gene

GeneCards Summary for LSM3P2 Gene

LSM3P2 (LSM3 Homolog, U6 Small Nuclear RNA And MRNA Degradation Associated Pseudogene 2) is a Pseudogene.

Additional gene information for LSM3P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LSM3P2 Gene

Genomics for LSM3P2 Gene

GeneHancer (GH) Regulatory Elements for LSM3P2 Gene

Promoters and enhancers for LSM3P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J094585 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -0.1 -99 10.1 SP7 ZIC2 ZBTB8A SP1 SCRT2 NR2F2 ZFHX2 KLF17 FOS EBF1 LSM3P2 lnc-PLXNC1-6 TMCC3 MIR7844
GH12J094584 Enhancer 0.2 dbSUPER 0.4 -5.8 -5799 1 TMCC3 LSM3P2 MIR7844
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LSM3P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LSM3P2 Gene

Genomic Locations for LSM3P2 Gene
chr12:94,590,738-94,591,378
(GRCh38/hg38)
Size:
641 bases
Orientation:
Plus strand
chr12:94,984,519-94,985,154
(GRCh37/hg19)
Size:
636 bases
Orientation:
Plus strand

Genomic View for LSM3P2 Gene

Genes around LSM3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LSM3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LSM3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LSM3P2 Gene

Proteins for LSM3P2 Gene

Post-translational modifications for LSM3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LSM3P2 Gene

Domains & Families for LSM3P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LSM3P2 Gene

Function for LSM3P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LSM3P2 Gene

Localization for LSM3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LSM3P2 Gene

Pathways & Interactions for LSM3P2 Gene

PathCards logo

SuperPathways for LSM3P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LSM3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LSM3P2 Gene

Drugs & Compounds for LSM3P2 Gene

No Compound Related Data Available

Transcripts for LSM3P2 Gene

mRNA/cDNA for LSM3P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LSM3P2 Gene

No ASD Table

Relevant External Links for LSM3P2 Gene

GeneLoc Exon Structure for
LSM3P2
ECgene alternative splicing isoforms for
LSM3P2

Expression for LSM3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LSM3P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of LSM3P2 Gene:

LSM3P2
genes like me logo Genes that share expression patterns with LSM3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LSM3P2 Gene

Orthologs for LSM3P2 Gene

Evolution for LSM3P2 Gene

ENSEMBL:
Gene Tree for LSM3P2 (if available)
TreeFam:
Gene Tree for LSM3P2 (if available)

No data available for Orthologs for LSM3P2 Gene

Paralogs for LSM3P2 Gene

No data available for Paralogs for LSM3P2 Gene

Variants for LSM3P2 Gene

Additional Variant Information for LSM3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LSM3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LSM3P2 Gene

Disorders for LSM3P2 Gene

No disorders were found for LSM3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LSM3P2 Gene

Publications for LSM3P2 Gene

No publications were found for LSM3P2 Gene.

No data available for External Links for LSM3P2 Gene

Products for LSM3P2 Gene

Sources for LSM3P2 Gene