Aliases for LSM12P1 Gene

Aliases for LSM12P1 Gene

  • LSM12 Pseudogene 1 2 3 5
  • LSM12 Homolog (S. Cerevisiae) Pseudogene 1 2
  • LSM12 Homolog (S. Cerevisiae) Pseudogene 2
  • LSM12 Homolog Pseudogene 1 3
  • LSM12P 3

External Ids for LSM12P1 Gene

Previous HGNC Symbols for LSM12P1 Gene

  • LSM12P

Previous GeneCards Identifiers for LSM12P1 Gene

  • GC08M035381
  • GC08M033915

Summaries for LSM12P1 Gene

GeneCards Summary for LSM12P1 Gene

LSM12P1 (LSM12 Pseudogene 1) is a Pseudogene.

Additional gene information for LSM12P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LSM12P1 Gene

Genomics for LSM12P1 Gene

GeneHancer (GH) Regulatory Elements for LSM12P1 Gene

Promoters and enhancers for LSM12P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J035525 Promoter/Enhancer 0.6 FANTOM5 Ensembl 500.7 +0.2 229 0.5 LSM12P1 lnc-DUSP26-14 piR-50443-358 UNC5D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LSM12P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LSM12P1 Gene

Genomic Locations for LSM12P1 Gene
chr8:35,523,579-35,525,774
(GRCh38/hg38)
Size:
2,196 bases
Orientation:
Minus strand
chr8:35,381,118-35,383,293
(GRCh37/hg19)
Size:
2,176 bases
Orientation:
Minus strand

Genomic View for LSM12P1 Gene

Genes around LSM12P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LSM12P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LSM12P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LSM12P1 Gene

Proteins for LSM12P1 Gene

Post-translational modifications for LSM12P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LSM12P1 Gene

Domains & Families for LSM12P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LSM12P1 Gene

Function for LSM12P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LSM12P1 Gene

Localization for LSM12P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LSM12P1 Gene

Pathways & Interactions for LSM12P1 Gene

PathCards logo

SuperPathways for LSM12P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LSM12P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LSM12P1 Gene

Drugs & Compounds for LSM12P1 Gene

No Compound Related Data Available

Transcripts for LSM12P1 Gene

mRNA/cDNA for LSM12P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for LSM12P1 Gene

No ASD Table

Relevant External Links for LSM12P1 Gene

GeneLoc Exon Structure for
LSM12P1

Expression for LSM12P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LSM12P1 Gene

genes like me logo Genes that share expression patterns with LSM12P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LSM12P1 Gene

Orthologs for LSM12P1 Gene

Evolution for LSM12P1 Gene

ENSEMBL:
Gene Tree for LSM12P1 (if available)
TreeFam:
Gene Tree for LSM12P1 (if available)

No data available for Orthologs for LSM12P1 Gene

Paralogs for LSM12P1 Gene

No data available for Paralogs for LSM12P1 Gene

Variants for LSM12P1 Gene

Additional Variant Information for LSM12P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LSM12P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LSM12P1 Gene

Disorders for LSM12P1 Gene

Additional Disease Information for LSM12P1

Genetic Association Database
(GAD)

No disorders were found for LSM12P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LSM12P1 Gene

Publications for LSM12P1 Gene

  1. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41 54
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 41 54
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 54

No data available for Mastermind for LSM12P1 Gene

Products for LSM12P1 Gene

Sources for LSM12P1 Gene