Aliases for LRRFIP1P1 Gene

Aliases for LRRFIP1P1 Gene

  • LRR Binding FLII Interacting Protein 1 Pseudogene 1 2 3 5
  • Leucine Rich Repeat (In FLII) Interacting Protein 1 Pseudogene 1 2 3
  • LRRFIP1P1 5

External Ids for LRRFIP1P1 Gene

Previous GeneCards Identifiers for LRRFIP1P1 Gene

  • GC03U901717
  • GC03M178977

Summaries for LRRFIP1P1 Gene

GeneCards Summary for LRRFIP1P1 Gene

LRRFIP1P1 (LRR Binding FLII Interacting Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for LRRFIP1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LRRFIP1P1 Gene

Genomics for LRRFIP1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LRRFIP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J179260 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas 600.7 +0.3 266 1.8 GATAD2A HNRNPL PRDM10 BACH1 LARP7 RBFOX2 REST ZNF740 EZH2 DPF2 LRRFIP1P1 ZNF639 GNB4 MFN1 PIK3CA KCNMB3 lnc-GNB4-2
GH03J179082 Enhancer 0.6 Ensembl 4.9 +178.1 178066 3 CREB1 ZNF629 KDM1A FOXA1 ELF1 CTCF GATA3 ATF3 FOS ZFP37 PIK3CA LOC101928739 ZNF639 LRRFIP1P1 ENSG00000200616 ZMAT3
GH03J179261 Promoter 1.3 EPDnew Ensembl 0.7 +2.6 2565 2 PRDM10 IKZF1 PRDM1 PKNOX1 ZNF24 SOX6 SOX13 MGA MTA3 CTBP1 KCNMB3 ZNF639 PIK3CA LOC101928739 LRRFIP1P1 lnc-GNB4-2
GH03J179247 Enhancer 0.3 Ensembl 0.4 +13.7 13666 1 JUN LOC101928739 PIK3CA PEX5L lnc-GNB4-2 LRRFIP1P1 KCNMB3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LRRFIP1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LRRFIP1P1 Gene

Genomic Locations for LRRFIP1P1 Gene
chr3:179,257,260-179,261,567
(GRCh38/hg38)
Size:
4,308 bases
Orientation:
Minus strand
chr3:178,976,816-178,979,061
(GRCh37/hg19)
Size:
2,246 bases
Orientation:
Minus strand

Genomic View for LRRFIP1P1 Gene

Genes around LRRFIP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LRRFIP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LRRFIP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LRRFIP1P1 Gene

Proteins for LRRFIP1P1 Gene

Post-translational modifications for LRRFIP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LRRFIP1P1 Gene

Domains & Families for LRRFIP1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LRRFIP1P1 Gene

Function for LRRFIP1P1 Gene

Phenotypes From GWAS Catalog for LRRFIP1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LRRFIP1P1 Gene

Localization for LRRFIP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LRRFIP1P1 Gene

Pathways & Interactions for LRRFIP1P1 Gene

PathCards logo

SuperPathways for LRRFIP1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LRRFIP1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LRRFIP1P1 Gene

Drugs & Compounds for LRRFIP1P1 Gene

No Compound Related Data Available

Transcripts for LRRFIP1P1 Gene

mRNA/cDNA for LRRFIP1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LRRFIP1P1 Gene

No ASD Table

Relevant External Links for LRRFIP1P1 Gene

GeneLoc Exon Structure for
LRRFIP1P1

Expression for LRRFIP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LRRFIP1P1 Gene

genes like me logo Genes that share expression patterns with LRRFIP1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LRRFIP1P1 Gene

Orthologs for LRRFIP1P1 Gene

Evolution for LRRFIP1P1 Gene

ENSEMBL:
Gene Tree for LRRFIP1P1 (if available)
TreeFam:
Gene Tree for LRRFIP1P1 (if available)

No data available for Orthologs for LRRFIP1P1 Gene

Paralogs for LRRFIP1P1 Gene

No data available for Paralogs for LRRFIP1P1 Gene

Variants for LRRFIP1P1 Gene

Additional Variant Information for LRRFIP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LRRFIP1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LRRFIP1P1 Gene

Disorders for LRRFIP1P1 Gene

No disorders were found for LRRFIP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LRRFIP1P1 Gene

Publications for LRRFIP1P1 Gene

No publications were found for LRRFIP1P1 Gene.

No data available for Mastermind for LRRFIP1P1 Gene

Products for LRRFIP1P1 Gene

Sources for LRRFIP1P1 Gene