Aliases for LRRC57P1 Gene

Aliases for LRRC57P1 Gene

  • LRRC57 Pseudogene 1 2 3
  • Leucine Rich Repeat Containing 57 (LRRC57) Pseudogene 5
  • Leucine Rich Repeat Containing 57 Pseudogene 3
  • AC010740.1 5

External Ids for LRRC57P1 Gene

Summaries for LRRC57P1 Gene

GeneCards Summary for LRRC57P1 Gene

LRRC57P1 (LRRC57 Pseudogene 1) is a Pseudogene.

Additional gene information for LRRC57P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LRRC57P1 Gene

Genomics for LRRC57P1 Gene

GeneHancer (GH) Regulatory Elements for LRRC57P1 Gene

Promoters and enhancers for LRRC57P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J140893 Enhancer 0.7 Ensembl ENCODE 0.7 -4.8 -4789 1.3 FOS MAFK JUND NFATC1 BCL3 RXRA CEBPB STAT3 LRRC57P1 lnc-KYNU-13 piR-32285-056
GH02J140905 Enhancer 0.7 Ensembl ENCODE 0.4 +7.1 7078 1 HDAC2 NANOG TCF12 JUND CHD7 EP300 SP1 POU5F1 POLR2A LRRC57P1 lnc-KYNU-13 piR-57134-068
GH02J140894 Enhancer 0.4 Ensembl 0.7 -2.9 -2922 0.6 ZBTB48 GLIS1 MZF1 RBBP5 LRRC57P1 lnc-KYNU-13 piR-32285-056
GH02J140882 Enhancer 0.3 Ensembl ENCODE 0.4 -15.3 -15288 1.5 LRRC57P1 lnc-KYNU-13 piR-32285-056
GH02J140880 Enhancer 0.3 Ensembl ENCODE 0.4 -17.6 -17561 0.9 LRRC57P1 lnc-KYNU-13 piR-32285-056
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LRRC57P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LRRC57P1 Gene

Genomic Locations for LRRC57P1 Gene
chr2:140,898,423-140,899,106
(GRCh38/hg38)
Size:
684 bases
Orientation:
Plus strand
chr2:141,655,992-141,656,675
(GRCh37/hg19)
Size:
684 bases
Orientation:
Plus strand

Genomic View for LRRC57P1 Gene

Genes around LRRC57P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LRRC57P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LRRC57P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LRRC57P1 Gene

Proteins for LRRC57P1 Gene

Post-translational modifications for LRRC57P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LRRC57P1 Gene

Domains & Families for LRRC57P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LRRC57P1 Gene

Function for LRRC57P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LRRC57P1 Gene

Localization for LRRC57P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LRRC57P1 Gene

Pathways & Interactions for LRRC57P1 Gene

PathCards logo

SuperPathways for LRRC57P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LRRC57P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LRRC57P1 Gene

Drugs & Compounds for LRRC57P1 Gene

No Compound Related Data Available

Transcripts for LRRC57P1 Gene

mRNA/cDNA for LRRC57P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LRRC57P1 Gene

No ASD Table

Relevant External Links for LRRC57P1 Gene

GeneLoc Exon Structure for
LRRC57P1

Expression for LRRC57P1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LRRC57P1 Gene

Orthologs for LRRC57P1 Gene

Evolution for LRRC57P1 Gene

ENSEMBL:
Gene Tree for LRRC57P1 (if available)
TreeFam:
Gene Tree for LRRC57P1 (if available)

No data available for Orthologs for LRRC57P1 Gene

Paralogs for LRRC57P1 Gene

No data available for Paralogs for LRRC57P1 Gene

Variants for LRRC57P1 Gene

Additional Variant Information for LRRC57P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LRRC57P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LRRC57P1 Gene

Disorders for LRRC57P1 Gene

No disorders were found for LRRC57P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LRRC57P1 Gene

Publications for LRRC57P1 Gene

No publications were found for LRRC57P1 Gene.

No data available for Mastermind for LRRC57P1 Gene

Products for LRRC57P1 Gene

Sources for LRRC57P1 Gene