Aliases for LRRC37A4P Gene

Aliases for LRRC37A4P Gene

  • Leucine Rich Repeat Containing 37 Member A4, Pseudogene 2 3 5
  • LRRC37A4 3
  • LRRC37 3

External Ids for LRRC37A4P Gene

Previous HGNC Symbols for LRRC37A4P Gene

  • LRRC37A4

Previous GeneCards Identifiers for LRRC37A4P Gene

  • GC17M043580
  • GC17M043600

Summaries for LRRC37A4P Gene

GeneCards Summary for LRRC37A4P Gene

LRRC37A4P (Leucine Rich Repeat Containing 37 Member A4, Pseudogene) is a Pseudogene.

Additional gene information for LRRC37A4P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LRRC37A4P Gene

Genomics for LRRC37A4P Gene

GeneHancer (GH) Regulatory Elements for LRRC37A4P Gene

Promoters and enhancers for LRRC37A4P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LRRC37A4P on UCSC Golden Path with GeneCards custom track

Genomic Locations for LRRC37A4P Gene

Genomic Locations for LRRC37A4P Gene
chr17:45,505,883-45,551,537
(GRCh38/hg38)
Size:
45,655 bases
Orientation:
Minus strand
chr17:43,578,685-43,627,701
(GRCh37/hg19)
Size:
49,017 bases
Orientation:
Minus strand

Genomic View for LRRC37A4P Gene

Genes around LRRC37A4P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LRRC37A4P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LRRC37A4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LRRC37A4P Gene

Proteins for LRRC37A4P Gene

Post-translational modifications for LRRC37A4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for LRRC37A4P Gene

Domains & Families for LRRC37A4P Gene

Suggested Antigen Peptide Sequences for LRRC37A4P Gene

GenScript: Design optimal peptide antigens:
  • Putative protein LRRC37A4 (L37A4_HUMAN)

No data available for Gene Families , Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LRRC37A4P Gene

Function for LRRC37A4P Gene

Phenotypes From GWAS Catalog for LRRC37A4P Gene

genes like me logo Genes that share phenotypes with LRRC37A4P: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LRRC37A4P Gene

Localization for LRRC37A4P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LRRC37A4P Gene

Pathways & Interactions for LRRC37A4P Gene

PathCards logo

SuperPathways for LRRC37A4P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LRRC37A4P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LRRC37A4P Gene

Drugs & Compounds for LRRC37A4P Gene

No Compound Related Data Available

Transcripts for LRRC37A4P Gene

mRNA/cDNA for LRRC37A4P Gene

1 REFSEQ mRNAs :
39 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for LRRC37A4P Gene

No ASD Table

Relevant External Links for LRRC37A4P Gene

GeneLoc Exon Structure for
LRRC37A4P

Expression for LRRC37A4P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LRRC37A4P Gene

mRNA differential expression in normal tissues according to GTEx for LRRC37A4P Gene

This gene is overexpressed in Brain - Cerebellum (x5.2), Brain - Cerebellar Hemisphere (x4.9), and Testis (x4.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LRRC37A4P

SOURCE GeneReport for Unigene cluster for LRRC37A4P Gene:

Hs.596756
genes like me logo Genes that share expression patterns with LRRC37A4P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LRRC37A4P Gene

Orthologs for LRRC37A4P Gene

Evolution for LRRC37A4P Gene

ENSEMBL:
Gene Tree for LRRC37A4P (if available)
TreeFam:
Gene Tree for LRRC37A4P (if available)

No data available for Orthologs for LRRC37A4P Gene

Paralogs for LRRC37A4P Gene

No data available for Paralogs for LRRC37A4P Gene

Variants for LRRC37A4P Gene

Structural Variations from Database of Genomic Variants (DGV) for LRRC37A4P Gene

Variant ID Type Subtype PubMed ID
dgv123e55 CNV loss 17911159
dgv124e55 CNV loss 17911159
dgv1473n106 CNV duplication 24896259
dgv1760e59 CNV duplication 20981092
dgv3176n100 CNV gain 25217958
dgv5610n54 CNV loss 21841781
dgv5611n54 CNV loss 21841781
dgv5612n54 CNV loss 21841781
dgv5613n54 CNV loss 21841781
dgv927e212 CNV loss 25503493
dgv928e212 CNV gain 25503493
esv26189 CNV gain+loss 19812545
esv2758691 CNV gain+loss 17122850
esv2760446 CNV loss 21179565
esv2762433 CNV gain+loss 21179565
esv33076 CNV gain+loss 17666407
esv3640666 CNV loss 21293372
nsv1077843 CNV duplication 25765185
nsv1146669 OTHER inversion 26484159
nsv161 CNV insertion 15895083
nsv162 CNV insertion 15895083
nsv2063 CNV insertion 18451855
nsv428342 CNV gain 18775914
nsv442746 CNV loss 18776908
nsv509659 CNV insertion 20534489
nsv511056 OTHER complex 20534489
nsv514848 CNV gain 21397061
nsv524234 CNV loss 19592680
nsv575106 CNV loss 21841781
nsv575116 CNV loss 21841781
nsv575121 CNV loss 21841781
nsv820961 CNV duplication 20802225
nsv953905 CNV deletion 24416366
nsv9563 CNV gain+loss 18304495
nsv962329 CNV duplication 23825009
nsv962404 CNV duplication 23825009

Additional Variant Information for LRRC37A4P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LRRC37A4P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for LRRC37A4P Gene

Disorders for LRRC37A4P Gene

Additional Disease Information for LRRC37A4P

No disorders were found for LRRC37A4P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LRRC37A4P Gene

Publications for LRRC37A4P Gene

  1. VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. (PMID: 29507755) Yue Y … Liu J (Cell discovery 2018) 3 54
  2. Evolutionary dynamism of the primate LRRC37 gene family. (PMID: 23064749) Giannuzzi G … Eichler EE (Genome research 2013) 3 54
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for LRRC37A4P Gene

Sources for LRRC37A4P Gene