Aliases for LRRC37A17P Gene

Aliases for LRRC37A17P Gene

  • Leucine Rich Repeat Containing 37 Member A17, Pseudogene 2 3 5
  • Leucine Rich Repeat Containing 37, Member A17, Pseudogene 2
  • Leucine-Rich Repeat Containing 37 Member A17, Pseudogene 2
  • Leucine Rich Repeat Containing 37, Member A2 Pseudogene 3
  • Leucine Rich Repeat Containing 37A Pseudogene 3
  • LRRC37A5 3

External Ids for LRRC37A17P Gene

Previous GeneCards Identifiers for LRRC37A17P Gene

  • GC17P045057

Summaries for LRRC37A17P Gene

GeneCards Summary for LRRC37A17P Gene

LRRC37A17P (Leucine Rich Repeat Containing 37 Member A17, Pseudogene) is a Pseudogene.

Additional gene information for LRRC37A17P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LRRC37A17P Gene

Genomics for LRRC37A17P Gene

GeneHancer (GH) Regulatory Elements for LRRC37A17P Gene

Promoters and enhancers for LRRC37A17P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J046978 Promoter 1 Ensembl 500.7 +0.6 620 1.4 ZIC2 ZNF423 ZBTB26 RFX1 EZH2 ZNF341 KLF9 SP2 ZBTB17 MXI1 RPRML LRRC37A17P lnc-GOSR2-2 MYL4 CDC27 ENSG00000262633
GH17J046976 Enhancer 0.8 ENCODE 500.7 -1.7 -1671 0.1 CTCF ZNF639 REST MYC NCOR1 ZNF316 ZBTB17 FOSL1 MAX NFE2 LRRC37A17P lnc-GOSR2-2 RPRML MYL4 piR-39307 ENSG00000262633
GH17J046979 Enhancer 0.8 ENCODE 500.7 -1.6 -1585 0 CTCF ZNF639 REST MYC NCOR1 ZNF316 ZBTB17 FOSL1 MAX NFE2 LRRC37A17P lnc-GOSR2-2 piR-39307 ENSG00000262633
GH17J046977 Enhancer 0.7 ENCODE 500.7 -0.9 -941 0.2 CTCF ZNF510 REST HDAC2 SP2 YY1 E2F6 SIN3A IKZF3 ZBTB7A LRRC37A17P RPRML lnc-GOSR2-2 MYL4 CDC27 piR-39307 ENSG00000262633
GH17J047647 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 19.4 +671.5 671468 5.1 RXRA EP300 HNRNPK ZBTB40 ZNF217 SIN3A NRF1 TCF12 MYC POLR2G KPNB1 ENSG00000263766 MRPL45P2 EFCAB13 SP2 ENSG00000266601 ENSG00000264701 ENSG00000239291 RPS7P11 TBKBP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LRRC37A17P on UCSC Golden Path with GeneCards custom track

Genomic Locations for LRRC37A17P Gene

Genomic Locations for LRRC37A17P Gene
chr17:46,978,481-47,054,569
(GRCh38/hg38)
Size:
76,089 bases
Orientation:
Plus strand
chr17:45,055,847-45,131,935
(GRCh37/hg19)
Size:
76,089 bases
Orientation:
Plus strand

Genomic View for LRRC37A17P Gene

Genes around LRRC37A17P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LRRC37A17P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LRRC37A17P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LRRC37A17P Gene

Proteins for LRRC37A17P Gene

Post-translational modifications for LRRC37A17P Gene

No Post-translational modifications

No data available for DME Specific Peptides for LRRC37A17P Gene

Domains & Families for LRRC37A17P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LRRC37A17P Gene

Function for LRRC37A17P Gene

Phenotypes From GWAS Catalog for LRRC37A17P Gene

Phenotypes for LRRC37A17P Gene

genes like me logo Genes that share phenotypes with LRRC37A17P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LRRC37A17P Gene

Localization for LRRC37A17P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LRRC37A17P Gene

Pathways & Interactions for LRRC37A17P Gene

PathCards logo

SuperPathways for LRRC37A17P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LRRC37A17P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LRRC37A17P Gene

Drugs & Compounds for LRRC37A17P Gene

No Compound Related Data Available

Transcripts for LRRC37A17P Gene

mRNA/cDNA for LRRC37A17P Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LRRC37A17P Gene

No ASD Table

Relevant External Links for LRRC37A17P Gene

GeneLoc Exon Structure for
LRRC37A17P

Expression for LRRC37A17P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LRRC37A17P Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LRRC37A17P

genes like me logo Genes that share expression patterns with LRRC37A17P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LRRC37A17P Gene

Orthologs for LRRC37A17P Gene

Evolution for LRRC37A17P Gene

ENSEMBL:
Gene Tree for LRRC37A17P (if available)
TreeFam:
Gene Tree for LRRC37A17P (if available)

No data available for Orthologs for LRRC37A17P Gene

Paralogs for LRRC37A17P Gene

No data available for Paralogs for LRRC37A17P Gene

Variants for LRRC37A17P Gene

Additional Variant Information for LRRC37A17P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LRRC37A17P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LRRC37A17P Gene

Disorders for LRRC37A17P Gene

No disorders were found for LRRC37A17P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LRRC37A17P Gene

Publications for LRRC37A17P Gene

  1. Evolutionary dynamism of the primate LRRC37 gene family. (PMID: 23064749) Giannuzzi G … Eichler EE (Genome research 2013) 2 3 54

Products for LRRC37A17P Gene

Sources for LRRC37A17P Gene