Aliases for LPGAT1P1 Gene

Aliases for LPGAT1P1 Gene

  • Lysophosphatidylglycerol Acyltransferase 1 Pseudogene 1 2 3
  • Family With Sequence Similarity 34, Member A2 Pseudogene 2 3
  • Lysophosphatidylglycerol Acyltransferase 1 (LPGAT1) Pseudogene 5
  • Family With Sequence Similarity 34, Member B Pseudogene 3
  • AC008066.1 5
  • FAM34A2P 3
  • FAM34BP 3

External Ids for LPGAT1P1 Gene

Previous HGNC Symbols for LPGAT1P1 Gene

  • FAM34BP
  • FAM34A2P

Previous GeneCards Identifiers for LPGAT1P1 Gene

  • GC08U900554
  • GC08M030841

Summaries for LPGAT1P1 Gene

GeneCards Summary for LPGAT1P1 Gene

LPGAT1P1 (Lysophosphatidylglycerol Acyltransferase 1 Pseudogene 1) is a Pseudogene.

Additional gene information for LPGAT1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LPGAT1P1 Gene

Genomics for LPGAT1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LPGAT1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J030810 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 12.4 +172.3 172347 3.5 TBP MXD4 FEZF1 CEBPA MNT IKZF1 SMAD5 ETS1 IRF2 MBD2 PPP2CB WRN GTF2E2 RPS15AP24 ENSG00000272375 LPGAT1P1 ENSG00000253708 PURG lnc-PPP2CB-1 HE856163
GH08J030666 Enhancer 0.8 Ensembl ENCODE 12.3 +317.3 317302 0.5 CTCF THAP11 CEBPB REST TRIM22 SMC3 RAD21 DEAF1 ARID3A MBD1 ENSG00000272375 LPGAT1P1 PURG GTF2E2 HSALNG0064375 piR-38580-341 GSR RF00017-6937
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LPGAT1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LPGAT1P1 Gene

Latest Assembly
chr8:30,983,270-30,984,321
(GRCh38/hg38)
Size:
1,052 bases
Orientation:
Minus strand

Previous Assembly
chr8:30,840,786-30,841,837
(GRCh37/hg19 by Entrez Gene)
Size:
1,052 bases
Orientation:
Minus strand

chr8:30,840,975-30,841,837
(GRCh37/hg19 by Ensembl)
Size:
863 bases
Orientation:
Minus strand

Genomic View for LPGAT1P1 Gene

Genes around LPGAT1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LPGAT1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LPGAT1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LPGAT1P1 Gene

Proteins for LPGAT1P1 Gene

Post-translational modifications for LPGAT1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LPGAT1P1 Gene

Domains & Families for LPGAT1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LPGAT1P1 Gene

Function for LPGAT1P1 Gene

Phenotypes From GWAS Catalog for LPGAT1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LPGAT1P1 Gene

Localization for LPGAT1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LPGAT1P1 Gene

Pathways & Interactions for LPGAT1P1 Gene

PathCards logo

SuperPathways for LPGAT1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LPGAT1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LPGAT1P1 Gene

Drugs & Compounds for LPGAT1P1 Gene

No Compound Related Data Available

Transcripts for LPGAT1P1 Gene

mRNA/cDNA for LPGAT1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LPGAT1P1 Gene

No ASD Table

Relevant External Links for LPGAT1P1 Gene

GeneLoc Exon Structure for
LPGAT1P1

Expression for LPGAT1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LPGAT1P1 Gene

mRNA differential expression in normal tissues according to GTEx for LPGAT1P1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.7) and Brain - Cerebellum (x6.6).
genes like me logo Genes that share expression patterns with LPGAT1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LPGAT1P1 Gene

Orthologs for LPGAT1P1 Gene

Evolution for LPGAT1P1 Gene

ENSEMBL:
Gene Tree for LPGAT1P1 (if available)
TreeFam:
Gene Tree for LPGAT1P1 (if available)

No data available for Orthologs for LPGAT1P1 Gene

Paralogs for LPGAT1P1 Gene

No data available for Paralogs for LPGAT1P1 Gene

Variants for LPGAT1P1 Gene

Additional Variant Information for LPGAT1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LPGAT1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LPGAT1P1 Gene

Disorders for LPGAT1P1 Gene

No disorders were found for LPGAT1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LPGAT1P1 Gene

Publications for LPGAT1P1 Gene

No publications were found for LPGAT1P1 Gene.

No data available for Mastermind for LPGAT1P1 Gene

Products for LPGAT1P1 Gene

Sources for LPGAT1P1 Gene