Aliases for LPGAT1-AS1 Gene

Subcategory (RNA class) for LPGAT1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LPGAT1-AS1 Gene

  • LPGAT1 Antisense RNA 1 2 3 5
  • LPGAT1-AS1 2 5
  • NONHSAG004216.2 91
  • HSALNG0010316 164
  • Lnc-DTL-2 165

External Ids for LPGAT1-AS1 Gene

Summaries for LPGAT1-AS1 Gene

GeneCards Summary for LPGAT1-AS1 Gene

LPGAT1-AS1 (LPGAT1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LPGAT1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LPGAT1-AS1 Gene

Genomics for LPGAT1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs


GeneHancers around LPGAT1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LPGAT1-AS1 Gene

Genomic Locations for LPGAT1-AS1 Gene
chr1:211,829,636-211,853,704
(GRCh38/hg38)
Size:
24,069 bases
Orientation:
Plus strand

Genomic View for LPGAT1-AS1 Gene

Genes around LPGAT1-AS1 on UCSC Golden Path with GeneCards custom track
LPGAT1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LPGAT1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LPGAT1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LPGAT1-AS1 Gene

Proteins for LPGAT1-AS1 Gene

Post-translational modifications for LPGAT1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LPGAT1-AS1 Gene

Domains & Families for LPGAT1-AS1 Gene

Gene Families for LPGAT1-AS1 Gene

genes like me logo Genes that share domains with LPGAT1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LPGAT1-AS1 Gene

Function for LPGAT1-AS1 Gene

Phenotypes From GWAS Catalog for LPGAT1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LPGAT1-AS1 Gene

Localization for LPGAT1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LPGAT1-AS1 Gene

Pathways & Interactions for LPGAT1-AS1 Gene

PathCards logo

SuperPathways for LPGAT1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LPGAT1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LPGAT1-AS1 Gene

Drugs & Compounds for LPGAT1-AS1 Gene

No Compound Related Data Available

Transcripts for LPGAT1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LPGAT1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002BA738_9606 lncRNA 706 4

Ensembl: ENST00000457272 (view in UCSC) ,

LncBook: HSALNT0021329,

LNCipedia: lnc-DTL-2:1,

NONCODE: NONHSAT009331.2,

URS0000282D35_9606 lncRNA 545 4

Ensembl: ENST00000430623 (view in UCSC) ,

LncBook: HSALNT0021331,

LNCipedia: lnc-DTL-2:2,

NONCODE: NONHSAT009332.2,

URS0000A76DB6_9606 lncRNA 932 3

HGNC: 41221,

RefSeq: NR_135818,

LNCipedia: lnc-DTL-2:7,

URS0000241FA4_9606 lncRNA 433 3

Ensembl: ENST00000446560 (view in UCSC) ,

LncBook: HSALNT0021334,

LNCipedia: lnc-DTL-2:4,

URS0000A7729B_9606 lncRNA 927 2

RefSeq: NR_135819,

LNCipedia: lnc-DTL-2:8,

LPGAT1-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LPGAT1-AS1 Gene

5 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LPGAT1-AS1 Gene

No ASD Table

Relevant External Links for LPGAT1-AS1 Gene

GeneLoc Exon Structure for
LPGAT1-AS1

Expression for LPGAT1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LPGAT1-AS1 Gene

Orthologs for LPGAT1-AS1 Gene

Evolution for LPGAT1-AS1 Gene

ENSEMBL:
Gene Tree for LPGAT1-AS1 (if available)
TreeFam:
Gene Tree for LPGAT1-AS1 (if available)

No data available for Orthologs for LPGAT1-AS1 Gene

Paralogs for LPGAT1-AS1 Gene

No data available for Paralogs for LPGAT1-AS1 Gene

Variants for LPGAT1-AS1 Gene

Additional dbSNP identifiers (rs#s) for LPGAT1-AS1 Gene

Additional Variant Information for LPGAT1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LPGAT1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LPGAT1-AS1 Gene

Disorders for LPGAT1-AS1 Gene

No disorders were found for LPGAT1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LPGAT1-AS1 Gene

Publications for LPGAT1-AS1 Gene

No publications were found for LPGAT1-AS1 Gene.

No data available for Mastermind for LPGAT1-AS1 Gene

Products for LPGAT1-AS1 Gene

Sources for LPGAT1-AS1 Gene