Aliases for LOC93463 Gene

Subcategory (RNA class) for LOC93463 Gene


Quality Score for this RNA gene is


Aliases for LOC93463 Gene

  • Uncharacterized LOC93463 3
  • Novel Transcript 5
  • HSALNG0023306 169
  • Lnc-COL6A3-14 170
  • NONHSAG030893 94
  • AC105760.1 5

External Ids for LOC93463 Gene

Previous GeneCards Identifiers for LOC93463 Gene

  • GC02M235997
  • GC02M236641
  • GC02M237975
  • GC02U900416
  • GC02M238243
  • GC02M237741
  • GC02M237628
  • GC02M237958

Summaries for LOC93463 Gene

GeneCards Summary for LOC93463 Gene

LOC93463 (Uncharacterized LOC93463) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC93463 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC93463 Gene

Genomics for LOC93463 Gene

GeneHancer (GH) Regulatory Elements for LOC93463 Gene

Promoters and enhancers for LOC93463 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J237056 Enhancer 0.6 Ensembl ENCODE 750.6 -0.3 -333 0.2 MYC DPF2 RCOR1 SMARCE1 LOC93463 LOC105373950 ENSG00000227252
GH02J237058 Enhancer 0.4 Ensembl ENCODE 750.6 +0.1 84 0.3 ZNF687 5MWI_A-108 LOC93463 COPS8 ENSG00000227252
GH02J237084 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.7 -29.7 -29734 3.8 SIN3A ZNF24 SP1 ZBTB40 SIX5 MLX RBPJ POLR2A ATF1 CREB1 COPS8 ENSG00000227252 NONHSAG030895.2 piR-31292-110 RBM44 LRRFIP1 COL6A3 LOC93463
GH02J236987 Enhancer 1.5 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.6 +67.6 67566 3.6 NR2F1 NR2F6 MIXL1 HLF RAD21 MNT SP1 NCOA3 MYC CEBPG lnc-COPS8-2 RNU6-1051P LOC93463 LOC105373951 ENSG00000227252
GH02J237024 Enhancer 1.3 FANTOM5 Ensembl ENCODE 11.2 +29.9 29859 3.2 CTCF ATF1 CREB1 MIXL1 NFYC RAD21 ELF3 SP1 NCOA3 ZNF24 LOC93463 IQCA1 ACKR3 RF00026-624 RNU6-1051P 5MWI_A-108 ENSG00000227252
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC93463 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC93463 gene promoter:
  • Bach2
  • Nkx2-5
  • Nkx6-1
  • p53
  • Pax-4a
  • POU2F1
  • POU2F1a
  • POU6F1 (c2)
  • S8

Genomic Locations for LOC93463 Gene

Genomic Locations for LOC93463 Gene
7,569 bases
Minus strand
7,586 bases
Minus strand

Genomic View for LOC93463 Gene

Genes around LOC93463 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC93463 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC93463 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC93463 Gene

Proteins for LOC93463 Gene

Post-translational modifications for LOC93463 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC93463 Gene

Domains & Families for LOC93463 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC93463 Gene

Function for LOC93463 Gene

Phenotypes From GWAS Catalog for LOC93463 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC93463 Gene

Localization for LOC93463 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC93463 Gene

Pathways & Interactions for LOC93463 Gene

PathCards logo

SuperPathways for LOC93463 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC93463 Gene


No data available for Pathways by source and SIGNOR curated interactions for LOC93463 Gene

Drugs & Compounds for LOC93463 Gene

No Compound Related Data Available

Transcripts for LOC93463 Gene

mRNA/cDNA for LOC93463 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(11) RNACentral transcripts :
(5) LncBook transcripts :
(10) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC93463 Gene

No ASD Table

Relevant External Links for LOC93463 Gene

GeneLoc Exon Structure for

Expression for LOC93463 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC93463 Gene

SOURCE GeneReport for Unigene cluster for LOC93463 Gene:

genes like me logo Genes that share expression patterns with LOC93463: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC93463 Gene

Orthologs for LOC93463 Gene

Evolution for LOC93463 Gene

Gene Tree for LOC93463 (if available)
Gene Tree for LOC93463 (if available)

No data available for Orthologs for LOC93463 Gene

Paralogs for LOC93463 Gene

No data available for Paralogs for LOC93463 Gene

Variants for LOC93463 Gene

Sequence variations from dbSNP and Humsavar for LOC93463 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000087968 -- 237,048,694(-) G/A non_coding_transcript_variant
rs1000256723 -- 237,051,805(-) G/A intron_variant
rs1000339661 -- 237,056,405(-) T/C upstream_transcript_variant
rs1000877210 -- 237,056,154(-) T/C non_coding_transcript_variant
rs1001987203 -- 237,048,870(-) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC93463 Gene

Disorders for LOC93463 Gene

No disorders were found for LOC93463 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC93463 Gene

Publications for LOC93463 Gene

No publications were found for LOC93463 Gene.

No data available for External Links for LOC93463 Gene

Products for LOC93463 Gene

Sources for LOC93463 Gene