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Aliases for LOC93463 Gene

Subcategory (RNA class) for LOC93463 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC93463 Gene

  • Uncharacterized LOC93463 3
  • Novel Transcript 5
  • AC105760.1 5

External Ids for LOC93463 Gene

Previous GeneCards Identifiers for LOC93463 Gene

  • GC02M235997
  • GC02M236641
  • GC02M237975
  • GC02U900416
  • GC02M238243
  • GC02M237741
  • GC02M237628
  • GC02M237958

Summaries for LOC93463 Gene

GeneCards Summary for LOC93463 Gene

LOC93463 (Uncharacterized LOC93463) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC93463 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC93463 Gene

Genomics for LOC93463 Gene

GeneHancer (GH) Regulatory Elements for LOC93463 Gene

Promoters and enhancers for LOC93463 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J237054 Enhancer 0.2 Ensembl 600.7 +1.8 1766 0.4 LOC93463 IQCA1 GC02M237025
GH02J237084 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.7 -29.9 -29861 2.9 SP1 ZFX ELF3 ZKSCAN8 MNT SIX5 NKRF POLR2A GTF2F1 CSDE1 COPS8 ENSG00000227252 LRRFIP1 LOC93463 RBM44 ENSG00000224844
GH02J237024 Enhancer 1.4 FANTOM5 Ensembl ENCODE 11.2 +29.9 29908 3.1 ELF3 CTCF NCOA3 ZNF24 SP1 RAD21 FOSL2 CREB1 RXRA CEBPA LOC93463 IQCA1 ACKR3 GC02M237025 RNU6-1051P GC02M237016
GH02J236987 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10.6 +67.3 67311 2.1 MYC SP1 CEBPG RXRA CEBPA RXRB FOXA2 PKNOX1 ZNF592 YY1 RNU6-1051P LOC93463 LOC105373951 GC02M237016
GH02J236731 Enhancer 1 Ensembl ENCODE 10.4 +324.1 324088 2.8 NCOA3 SP1 FOSL2 CREB1 RXRA CEBPA CTBP1 CEBPB ZFX JUND ENSG00000232328 LOC93463 LOC105373948 GC02P236695
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC93463 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC93463 gene promoter:
  • Bach2
  • Nkx2-5
  • Nkx6-1
  • p53
  • Pax-4a
  • POU2F1
  • POU2F1a
  • POU6F1 (c2)
  • S8

Genomic Locations for LOC93463 Gene

Genomic Locations for LOC93463 Gene
chr2:237,048,599-237,056,167
(GRCh38/hg38)
Size:
7,569 bases
Orientation:
Minus strand
chr2:237,957,242-237,964,827
(GRCh37/hg19)
Size:
7,586 bases
Orientation:
Minus strand

Genomic View for LOC93463 Gene

Genes around LOC93463 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC93463 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC93463 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC93463 Gene

Proteins for LOC93463 Gene

Post-translational modifications for LOC93463 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC93463 Gene

Domains & Families for LOC93463 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC93463 Gene

Function for LOC93463 Gene

Phenotypes From GWAS Catalog for LOC93463 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC93463 Gene

Localization for LOC93463 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC93463 Gene

Pathways & Interactions for LOC93463 Gene

PathCards logo

SuperPathways for LOC93463 Gene

No Data Available

Interacting Proteins for LOC93463 Gene

Gene Ontology (GO) - Biological Process for LOC93463 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC93463 Gene

Drugs & Compounds for LOC93463 Gene

No Compound Related Data Available

Transcripts for LOC93463 Gene

mRNA/cDNA for LOC93463 Gene

(1) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Unigene Clusters for LOC93463 Gene

Uncharacterized LOC93463:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC93463 Gene

No ASD Table

Relevant External Links for LOC93463 Gene

GeneLoc Exon Structure for
LOC93463

Expression for LOC93463 Gene

SOURCE GeneReport for Unigene cluster for LOC93463 Gene:

Hs.652810
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC93463 Gene

Orthologs for LOC93463 Gene

Evolution for LOC93463 Gene

ENSEMBL:
Gene Tree for LOC93463 (if available)
TreeFam:
Gene Tree for LOC93463 (if available)

No data available for Orthologs for LOC93463 Gene

Paralogs for LOC93463 Gene

No data available for Paralogs for LOC93463 Gene

Variants for LOC93463 Gene

Sequence variations from dbSNP and Humsavar for LOC93463 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000087968 -- 237,048,694(-) G/A non_coding_transcript_variant
rs1000256723 -- 237,051,805(-) G/A intron_variant
rs1000339661 -- 237,056,405(-) T/C upstream_transcript_variant
rs1000877210 -- 237,056,154(-) T/C non_coding_transcript_variant
rs1001987203 -- 237,048,870(-) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC93463 Gene

Disorders for LOC93463 Gene

No disorders were found for LOC93463 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC93463 Gene

Publications for LOC93463 Gene

No publications were found for LOC93463 Gene.

No data available for External Links for LOC93463 Gene

Products for LOC93463 Gene

Sources for LOC93463 Gene

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