Aliases for LOC91548 Gene

Subcategory (RNA class) for LOC91548 Gene

lncRNA

Aliases for LOC91548 Gene

  • Uncharacterized LOC91548 3

External Ids for LOC91548 Gene

Previous GeneCards Identifiers for LOC91548 Gene

  • GC01P210584
  • GC01P207721
  • GC01P208494
  • GC01U900718

Summaries for LOC91548 Gene

GeneCards Summary for LOC91548 Gene

LOC91548 (Uncharacterized LOC91548) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC91548 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC91548 Gene

Genomics for LOC91548 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC91548 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J211674 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.3 -262 2.6 SP1 CREB1 GATAD2A ATF7 PRDM10 ZNF629 TFE3 RFX1 LEF1 SOX13 ENSG00000231057 LOC91548 NEK2 lnc-LPGAT1-3 RCOR3 SNX25P1 RPL21P28 DTL INTS7 SLC30A1
GH01J211677 Enhancer 0.6 Ensembl 600.7 +1.9 1939 0.2 TCF12 IKZF2 YY1 EED DPF2 RELB RUNX3 BCL11A NBN IKZF1 ENSG00000231057 LOC91548 NEK2 piR-56133-015 LPGAT1
GH01J211680 Enhancer 1 Ensembl ENCODE 0.4 +5.5 5517 1.8 CTCF ZNF512 STAT3 ZNF143 RELA ZNF24 REST RAD21 TRIM22 HDAC1 LPGAT1 LPGAT1-AS1 ENSG00000212187 DTL INTS7 ENSG00000231057 LOC91548 NEK2 piR-56133-015
GH01J211678 Enhancer 0.3 Ensembl 0.7 +2.5 2539 0.2 DPF2 ZNF664 LPGAT1 LPGAT1-AS1 ENSG00000212187 DTL INTS7 ENSG00000231057 LOC91548 NEK2 piR-56133-015
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC91548 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC91548 Gene

Genomic Locations for LOC91548 Gene
chr1:211,675,762-211,687,459
(GRCh38/hg38)
Size:
11,698 bases
Orientation:
Plus strand

Genomic View for LOC91548 Gene

Genes around LOC91548 on UCSC Golden Path with GeneCards custom track
LOC91548 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC91548 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC91548 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC91548 Gene

Proteins for LOC91548 Gene

Post-translational modifications for LOC91548 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC91548 Gene

Domains & Families for LOC91548 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC91548 Gene

Function for LOC91548 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC91548 Gene

Localization for LOC91548 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC91548 Gene

Pathways & Interactions for LOC91548 Gene

PathCards logo

SuperPathways for LOC91548 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC91548 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC91548 Gene

Drugs & Compounds for LOC91548 Gene

No Compound Related Data Available

Transcripts for LOC91548 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC91548 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000BC44A0_9606 lncRNA 1424 1

RefSeq: NR_148994,

LOC91548 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC91548 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC91548 Gene

No ASD Table

Relevant External Links for LOC91548 Gene

GeneLoc Exon Structure for
LOC91548

Expression for LOC91548 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC91548 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC91548

SOURCE GeneReport for Unigene cluster for LOC91548 Gene:

Hs.367839
genes like me logo Genes that share expression patterns with LOC91548: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC91548 Gene

Orthologs for LOC91548 Gene

No data available for Orthologs and Evolution for LOC91548 Gene

Paralogs for LOC91548 Gene

No data available for Paralogs for LOC91548 Gene

Variants for LOC91548 Gene

Additional dbSNP identifiers (rs#s) for LOC91548 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC91548 Gene

Disorders for LOC91548 Gene

No disorders were found for LOC91548 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC91548 Gene

Publications for LOC91548 Gene

No publications were found for LOC91548 Gene.

No data available for Mastermind for LOC91548 Gene

Products for LOC91548 Gene

Sources for LOC91548 Gene