Aliases for LOC732229 Gene

Aliases for LOC732229 Gene

  • AN1-Type Zinc Finger Protein 5 Pseudogene 3

External Ids for LOC732229 Gene

Previous GeneCards Identifiers for LOC732229 Gene

  • GC19U900709
  • GC19M047682
  • GC19M042989

Summaries for LOC732229 Gene

GeneCards Summary for LOC732229 Gene

LOC732229 (AN1-Type Zinc Finger Protein 5 Pseudogene) is a Pseudogene.

Additional gene information for LOC732229 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC732229 Gene

Genomics for LOC732229 Gene

GeneHancer (GH) Regulatory Elements for LOC732229 Gene

Promoters and enhancers for LOC732229 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J042487 Enhancer 0.8 Ensembl ENCODE dbSUPER 500.7 -1.8 -1836 0.4 NR2F2 STAT1 MAFG ZBTB40 ENSG00000269374 LOC732229 lnc-CEACAM1-2 piR-50443-202 LIPE-AS1
GH19J042485 Enhancer 0.3 Ensembl dbSUPER 500.7 +0.4 365 0.8 ENSG00000269374 LOC732229 lnc-CEACAM1-2 RNU4-60P LIPE-AS1
GH19J042488 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -3.2 -3153 1.4 NCOR1 TCF7 FOXA1 SKI TEAD1 TBX3 FOXA2 CEBPB SAP130 HDAC1 CXCL17 LOC732229 piR-50443-202 LIPE-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC732229 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC732229 gene promoter:
  • E47
  • ER-alpha
  • GCNF
  • GCNF-1
  • GCNF-2
  • POU3F2
  • POU3F2 (N-Oct-5a)
  • POU3F2 (N-Oct-5b)
  • SEF-1 (1)
  • Tal-1

Genomic Locations for LOC732229 Gene

Genomic Locations for LOC732229 Gene
chr19:42,485,054-42,485,765
(GRCh38/hg38)
Size:
712 bases
Orientation:
Minus strand
chr19:42,989,225-42,989,866
(GRCh37/hg19)
Size:
642 bases
Orientation:
Minus strand

Genomic View for LOC732229 Gene

Genes around LOC732229 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC732229 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC732229 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC732229 Gene

Proteins for LOC732229 Gene

Post-translational modifications for LOC732229 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC732229 Gene

Domains & Families for LOC732229 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC732229 Gene

Function for LOC732229 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC732229 Gene

Localization for LOC732229 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC732229 Gene

Pathways & Interactions for LOC732229 Gene

PathCards logo

SuperPathways for LOC732229 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC732229 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC732229 Gene

Drugs & Compounds for LOC732229 Gene

No Compound Related Data Available

Transcripts for LOC732229 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC732229 Gene

No ASD Table

Relevant External Links for LOC732229 Gene

GeneLoc Exon Structure for
LOC732229

No data available for mRNA/cDNA for LOC732229 Gene

Expression for LOC732229 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC732229 Gene

Orthologs for LOC732229 Gene

No data available for Orthologs and Evolution for LOC732229 Gene

Paralogs for LOC732229 Gene

No data available for Paralogs for LOC732229 Gene

Variants for LOC732229 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC732229 Gene

Disorders for LOC732229 Gene

No disorders were found for LOC732229 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC732229 Gene

Publications for LOC732229 Gene

No publications were found for LOC732229 Gene.

No data available for Mastermind for LOC732229 Gene

Products for LOC732229 Gene

Sources for LOC732229 Gene