Aliases for LOC730222 Gene

Aliases for LOC730222 Gene

  • Tubulin Alpha 3d Pseudogene 3

External Ids for LOC730222 Gene

Previous GeneCards Identifiers for LOC730222 Gene

  • GC01M201089
  • GC01M202822

Summaries for LOC730222 Gene

GeneCards Summary for LOC730222 Gene

LOC730222 (Tubulin Alpha 3d Pseudogene) is a Pseudogene.

Additional gene information for LOC730222 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC730222 Gene

Genomics for LOC730222 Gene

GeneHancer (GH) Regulatory Elements for LOC730222 Gene

Promoters and enhancers for LOC730222 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J202856 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 750.6 -1.2 -1235 7.3 ZBTB40 SP1 SREBF1 ZBTB6 RBPJ NR2F1 NR2F6 FOS ZNF217 CREB1 ENSG00000214796 LOC148709 LOC730222 lnc-RABIF-1 lnc-TMEM183A-5 KDM5B ADIPOR1 RABIF PCAT6
GH01J202852 Enhancer 0.9 Ensembl ENCODE 0.4 +6.7 6699 0.7 CTCF CC2D1A L3MBTL2 RAD21 MNT TEAD4 REST CTBP1 POLR2A GTF2F1 KDM5B PCAT6 MGAT4EP piR-43106-015 ENSG00000214796 LOC730222 lnc-RABIF-1
GH01J202847 Enhancer 0.6 Ensembl 0.4 +11.3 11298 1.6 SP1 RXRA RXRB ZFHX2 BATF HNF4A KDM1A FEZF1 HNF4G ATF2 piR-43106-015 KDM5B PCAT6 MGAT4EP LOC730222
GH01J202854 Enhancer 0.3 Ensembl 0.4 +5.4 5398 1 POLR2A ZBTB17 KDM5B PCAT6 MGAT4EP RABIF ENSG00000214796 LOC730222 piR-43106-015 lnc-RABIF-1
GH01J202850 Enhancer 0.2 Ensembl 0.4 +8.2 8198 0.6 KDM5B PCAT6 MGAT4EP piR-43106-015 LOC730222 lnc-RABIF-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC730222 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC730222 Gene

Genomic Locations for LOC730222 Gene
chr1:202,853,012-202,859,099
(GRCh38/hg38)
Size:
6,088 bases
Orientation:
Minus strand
chr1:202,820,956-202,830,748
(GRCh37/hg19)
Size:
9,793 bases
Orientation:
Minus strand

Genomic View for LOC730222 Gene

Genes around LOC730222 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC730222 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC730222 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC730222 Gene

Proteins for LOC730222 Gene

Post-translational modifications for LOC730222 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC730222 Gene

Domains & Families for LOC730222 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC730222 Gene

Function for LOC730222 Gene

Phenotypes for LOC730222 Gene

genes like me logo Genes that share phenotypes with LOC730222: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC730222 Gene

Localization for LOC730222 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC730222 Gene

Pathways & Interactions for LOC730222 Gene

PathCards logo

SuperPathways for LOC730222 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC730222 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC730222 Gene

Drugs & Compounds for LOC730222 Gene

No Compound Related Data Available

Transcripts for LOC730222 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC730222 Gene

No ASD Table

Relevant External Links for LOC730222 Gene

GeneLoc Exon Structure for
LOC730222

No data available for mRNA/cDNA for LOC730222 Gene

Expression for LOC730222 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC730222 Gene

mRNA differential expression in normal tissues according to GTEx for LOC730222 Gene

This gene is overexpressed in Kidney - Cortex (x7.7).
genes like me logo Genes that share expression patterns with LOC730222: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC730222 Gene

Orthologs for LOC730222 Gene

No data available for Orthologs and Evolution for LOC730222 Gene

Paralogs for LOC730222 Gene

No data available for Paralogs for LOC730222 Gene

Variants for LOC730222 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC730222 Gene

Disorders for LOC730222 Gene

No disorders were found for LOC730222 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC730222 Gene

Publications for LOC730222 Gene

No publications were found for LOC730222 Gene.

No data available for External Links for LOC730222 Gene

Products for LOC730222 Gene

Sources for LOC730222 Gene