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Aliases for LOC729999 Gene

Aliases for LOC729999 Gene

  • Glycerol-3-Phosphate Dehydrogenase 2 (Mitochondrial) Pseudogene 3
  • AC006116.1 5

External Ids for LOC729999 Gene

Previous GeneCards Identifiers for LOC729999 Gene

  • GC19M061528
  • GC19M061532
  • GC19M056830

Summaries for LOC729999 Gene

GeneCards Summary for LOC729999 Gene

LOC729999 (Glycerol-3-Phosphate Dehydrogenase 2 (Mitochondrial) Pseudogene) is a Pseudogene.

Additional gene information for LOC729999 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC729999 Gene

Genomics for LOC729999 Gene

GeneHancer (GH) Regulatory Elements for LOC729999 Gene

Promoters and enhancers for LOC729999 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I056321 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.4 361 1.4 ATF1 SMAD1 NFRKB TCF12 ZNF766 GATA2 ATF7 CREM SMAD5 ZBTB11 LOC729999 ZSCAN5A VN2R17P LOC105372468 GC19P056275
GH19I056320 Enhancer 0.6 Ensembl dbSUPER 550.8 +1.5 1464 0.4 ZNF766 PHB2 LOC729999 VN2R17P LOC105372468 GC19P056275 ZSCAN5A
GH19I056594 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 40.6 -273.0 -272975 1.4 HDGF PKNOX1 ZNF133 ARID4B SIN3A FEZF1 YBX1 GLI4 ZNF48 YY1 ZNF71 U2AF2 ZNF17 ZNF543 ZNF549 ZNF264 ZNF773 ENSG00000269696 ZNF550 ZFP28
GH19I056403 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 31.1 -81.7 -81684 2 HDGF ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ZNF766 ZNF416 ZNF207 ZNF583 ZNF582-AS1 ZNF582 ZFP28 ZNF470 ZNF471 FIZ1 ZNF460-AS1 ENSG00000269696 ZNF542P
GH19I055519 Enhancer 1.4 FANTOM5 Ensembl ENCODE 31 +802.3 802256 1 HDGF ATF1 ZNF493 ZNF133 YBX1 GLI4 ZNF416 ZNF548 FOS ATF7 U2AF2 ZNF471 FIZ1 ZNF582 ZNF581 ZNF580 SSC5D ENSG00000267523 NAT14 ZNF667
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC729999 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC729999 Gene

Genomic Locations for LOC729999 Gene
chr19:56,318,760-56,322,465
(GRCh38/hg38)
Size:
3,706 bases
Orientation:
Minus strand
chr19:56,830,129-56,833,834
(GRCh37/hg19)

Genomic View for LOC729999 Gene

Genes around LOC729999 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC729999 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC729999 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC729999 Gene

Proteins for LOC729999 Gene

Post-translational modifications for LOC729999 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC729999 Gene

Domains & Families for LOC729999 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC729999 Gene

Function for LOC729999 Gene

Phenotypes From GWAS Catalog for LOC729999 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC729999 Gene

Localization for LOC729999 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC729999 Gene

Pathways & Interactions for LOC729999 Gene

SuperPathways for LOC729999 Gene

No Data Available

Interacting Proteins for LOC729999 Gene

Gene Ontology (GO) - Biological Process for LOC729999 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC729999 Gene

Drugs & Compounds for LOC729999 Gene

No Compound Related Data Available

Transcripts for LOC729999 Gene

mRNA/cDNA for LOC729999 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC729999 Gene

No ASD Table

Relevant External Links for LOC729999 Gene

GeneLoc Exon Structure for
LOC729999

Expression for LOC729999 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC729999 Gene

mRNA differential expression in normal tissues according to GTEx for LOC729999 Gene

This gene is overexpressed in Testis (x4.9).
genes like me logo Genes that share expression patterns with LOC729999: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC729999 Gene

Orthologs for LOC729999 Gene

Evolution for LOC729999 Gene

ENSEMBL:
Gene Tree for LOC729999 (if available)
TreeFam:
Gene Tree for LOC729999 (if available)

No data available for Orthologs for LOC729999 Gene

Paralogs for LOC729999 Gene

No data available for Paralogs for LOC729999 Gene

Variants for LOC729999 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC729999 Gene

Disorders for LOC729999 Gene

No disorders were found for LOC729999 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC729999 Gene

Publications for LOC729999 Gene

No publications were found for LOC729999 Gene.

Products for LOC729999 Gene

Sources for LOC729999 Gene

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