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Aliases for LOC729856 Gene

Aliases for LOC729856 Gene

  • Elongation Factor 1-Alpha-Like 3

External Ids for LOC729856 Gene

Previous GeneCards Identifiers for LOC729856 Gene

  • GC01P023869
  • GC01P023999

Summaries for LOC729856 Gene

GeneCards Summary for LOC729856 Gene

LOC729856 (Elongation Factor 1-Alpha-Like) is a Pseudogene.

Additional gene information for LOC729856 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC729856 Gene

Genomics for LOC729856 Gene

GeneHancer (GH) Regulatory Elements for LOC729856 Gene

Promoters and enhancers for LOC729856 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J023670 Enhancer 0.2 Ensembl 600.7 -0.7 -676 0.2 ENSG00000229239 LOC729856 RPL11 GC01P023610
GH01J023673 Enhancer 1.1 Ensembl ENCODE 0.7 +2.8 2793 0.3 ZNF652 ELF3 ZKSCAN8 ZNF148 TFE3 SP7 SP1 ZNF644 SMARCA4 CREB1 LOC729856 ENSG00000229239 RPL11
GH01J023689 Enhancer 0.3 Ensembl 0.4 +18.7 18670 0.5 FOXA2 RPL11 LOC729856
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC729856 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC729856 gene promoter:
  • c-Rel
  • COUP-TF1
  • CUTL1
  • ER-alpha
  • HNF-4alpha1
  • HNF-4alpha2
  • Nkx5-1
  • p53
  • POU2F1
  • POU2F1a

Genomic Locations for LOC729856 Gene

Genomic Locations for LOC729856 Gene
chr1:23,670,777-23,671,244
(GRCh38/hg38)
Size:
468 bases
Orientation:
Plus strand
chr1:23,996,784-24,006,749
(GRCh37/hg19)
Size:
9,966 bases
Orientation:
Plus strand

Genomic View for LOC729856 Gene

Genes around LOC729856 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC729856 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC729856 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC729856 Gene

Proteins for LOC729856 Gene

Post-translational modifications for LOC729856 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC729856 Gene

Domains & Families for LOC729856 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC729856 Gene

Function for LOC729856 Gene

Phenotypes for LOC729856 Gene

genes like me logo Genes that share phenotypes with LOC729856: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC729856 Gene

Localization for LOC729856 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC729856 Gene

Pathways & Interactions for LOC729856 Gene

PathCards logo

SuperPathways for LOC729856 Gene

No Data Available

Interacting Proteins for LOC729856 Gene

Gene Ontology (GO) - Biological Process for LOC729856 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC729856 Gene

Drugs & Compounds for LOC729856 Gene

No Compound Related Data Available

Transcripts for LOC729856 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC729856 Gene

No ASD Table

Relevant External Links for LOC729856 Gene

GeneLoc Exon Structure for
LOC729856

No data available for mRNA/cDNA for LOC729856 Gene

Expression for LOC729856 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC729856 Gene

genes like me logo Genes that share expression patterns with LOC729856: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC729856 Gene

Orthologs for LOC729856 Gene

No data available for Orthologs and Evolution for LOC729856 Gene

Paralogs for LOC729856 Gene

No data available for Paralogs for LOC729856 Gene

Variants for LOC729856 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC729856 Gene

Disorders for LOC729856 Gene

No disorders were found for LOC729856 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC729856 Gene

Publications for LOC729856 Gene

No publications were found for LOC729856 Gene.

No data available for External Links for LOC729856 Gene

Products for LOC729856 Gene

Sources for LOC729856 Gene

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