Aliases for LOC729835 Gene

Aliases for LOC729835 Gene

  • Ubiquitin Fold Modifier 1 Pseudogene 3

External Ids for LOC729835 Gene

Previous GeneCards Identifiers for LOC729835 Gene

  • GC17M030728
  • GC17M033704

Summaries for LOC729835 Gene

GeneCards Summary for LOC729835 Gene

LOC729835 (Ubiquitin Fold Modifier 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC729835 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC729835 Gene

Genomics for LOC729835 Gene

GeneHancer (GH) Regulatory Elements for LOC729835 Gene

Promoters and enhancers for LOC729835 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J035375 Promoter 0.7 Ensembl 500.7 +1.3 1346 0.4 ZNF316 ZBTB17 MAFF MAFK SPI1 MAFG EZH2 GFI1B PRDM1 ENSG00000267315 LOC729835 lnc-SLFN11-1 SLFN11
GH17J035377 Promoter 0.6 Ensembl 500.7 +0.2 246 0.2 OSR2 FOS NR3C1 SCRT2 ENSG00000267315 LOC729835 lnc-SLFN11-1 SLFN12 SLFN11
GH17J035372 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +4.2 4246 4.6 ZSCAN5C ZNF639 ZNF10 ZIC2 ZBTB10 POLR2A ZNF423 EZH2 ZEB1 ATF2 SLFN11 LOC105371933 lnc-SLFN12-5-002 lnc-SLFN5-3 LIG3 SLFN12 ZNF830 ENSG00000267102 ENSG00000267648 SNHG30
GH17J035380 Enhancer 0.4 Ensembl 0.7 -3.6 -3554 2.6 RAD51 MITF TOE1 SREBF1 SLFN11 ENSG00000267648 SLFN12 LOC729835 piR-45012-234
GH17J035389 Enhancer 0.4 Ensembl 0.4 -12.8 -12754 2.2 CEBPG CEBPB SPI1 SLFN11 ENSG00000267547 SLFN12 CCL23 piR-45012-234 LOC729835
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC729835 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC729835 Gene

Genomic Locations for LOC729835 Gene
chr17:35,375,236-35,377,747
(GRCh38/hg38)
Size:
2,512 bases
Orientation:
Minus strand
chr17:33,704,429-33,704,697
(GRCh37/hg19)
Size:
269 bases
Orientation:
Minus strand

Genomic View for LOC729835 Gene

Genes around LOC729835 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC729835 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC729835 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC729835 Gene

Proteins for LOC729835 Gene

Post-translational modifications for LOC729835 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC729835 Gene

Domains & Families for LOC729835 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC729835 Gene

Function for LOC729835 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC729835 Gene

Localization for LOC729835 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC729835 Gene

Pathways & Interactions for LOC729835 Gene

PathCards logo

SuperPathways for LOC729835 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC729835 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC729835 Gene

Drugs & Compounds for LOC729835 Gene

No Compound Related Data Available

Transcripts for LOC729835 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC729835 Gene

No ASD Table

Relevant External Links for LOC729835 Gene

GeneLoc Exon Structure for
LOC729835

No data available for mRNA/cDNA for LOC729835 Gene

Expression for LOC729835 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC729835 Gene

genes like me logo Genes that share expression patterns with LOC729835: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC729835 Gene

Orthologs for LOC729835 Gene

No data available for Orthologs and Evolution for LOC729835 Gene

Paralogs for LOC729835 Gene

No data available for Paralogs for LOC729835 Gene

Variants for LOC729835 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC729835 Gene

Disorders for LOC729835 Gene

No disorders were found for LOC729835 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC729835 Gene

Publications for LOC729835 Gene

No publications were found for LOC729835 Gene.

No data available for Mastermind for LOC729835 Gene

Products for LOC729835 Gene

Sources for LOC729835 Gene