Aliases for LOC728138 Gene

Aliases for LOC728138 Gene

  • KIAA2013 Pseudogene 3
  • LOC728138 Protein 13

External Ids for LOC728138 Gene

Previous GeneCards Identifiers for LOC728138 Gene

  • GC16M014990
  • GC16M014991
  • GC16M015082
  • GC16U901194

Summaries for LOC728138 Gene

GeneCards Summary for LOC728138 Gene

LOC728138 (KIAA2013 Pseudogene) is a Pseudogene.

Additional gene information for LOC728138 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC728138 Gene

Genomics for LOC728138 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC728138 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J014989 Promoter/Enhancer 1 Ensembl ENCODE dbSUPER 600.7 +0.6 625 1.4 RBFOX2 GATAD2B RNF2 TFDP1 SAP130 POLR2A ZFP69B MXI1 EZH2 ENSG00000261819 LOC728138 piR-49080 NPIPA2 NPIPA1 RRN3 ENSG00000263335 PDXDC1 NTAN1
GH16J014990 Enhancer 0.5 Ensembl 600.7 -0.6 -575 0.2 ZNF311 CEBPA ZBTB44 CEBPB ZNF662 NFIA KDM1A BCL6B CEBPG ENSG00000261819 LOC728138 PARN LOC100505915 RRN3 PKD1P6 PKD1P3 piR-61101-233 PDXDC1 NTAN1
GH16J014991 Enhancer 0.2 FANTOM5 600.7 -1.1 -1114 0.2 ENSG00000261819 LOC728138 BMERB1 piR-61101-233 PDXDC1 NTAN1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC728138 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC728138 Gene

Genomic Locations for LOC728138 Gene
chr16:14,988,009-14,990,326
(GRCh38/hg38)
Size:
2,318 bases
Orientation:
Minus strand
chr16:15,081,866-15,084,183
(GRCh37/hg19)
Size:
2,318 bases
Orientation:
Minus strand

Genomic View for LOC728138 Gene

Genes around LOC728138 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC728138 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC728138 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC728138 Gene

Proteins for LOC728138 Gene

  • Protein details for LOC728138 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B2RXJ9-B2RXJ9_HUMAN
    Recommended name:
    LOC728138 protein
    Protein Accession:
    B2RXJ9

    Protein attributes for LOC728138 Gene

    Size:
    633 amino acids
    Molecular mass:
    68936 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LOC728138 Gene

Post-translational modifications for LOC728138 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC728138 Gene

Domains & Families for LOC728138 Gene

Protein Domains for LOC728138 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for LOC728138 Gene

GenScript: Design optimal peptide antigens:
  • LOC728138 protein (B2RXJ9_HUMAN)
genes like me logo Genes that share domains with LOC728138: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC728138 Gene

Function for LOC728138 Gene

Phenotypes From GWAS Catalog for LOC728138 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC728138 Gene

Localization for LOC728138 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC728138 Gene

Pathways & Interactions for LOC728138 Gene

PathCards logo

SuperPathways for LOC728138 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC728138 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC728138 Gene

Drugs & Compounds for LOC728138 Gene

No Compound Related Data Available

Transcripts for LOC728138 Gene

mRNA/cDNA for LOC728138 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC728138 Gene

No ASD Table

Relevant External Links for LOC728138 Gene

GeneLoc Exon Structure for
LOC728138

Expression for LOC728138 Gene

Protein differential expression in normal tissues from HIPED for LOC728138 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for LOC728138 Gene



Protein tissue co-expression partners for LOC728138 Gene

SOURCE GeneReport for Unigene cluster for LOC728138 Gene:

Hs.647342

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC728138 Gene

Orthologs for LOC728138 Gene

No data available for Orthologs and Evolution for LOC728138 Gene

Paralogs for LOC728138 Gene

(1) SIMAP similar genes for LOC728138 Gene using alignment to 1 proteins:

  • B2RXJ9_HUMAN
genes like me logo Genes that share paralogs with LOC728138: view

No data available for Paralogs for LOC728138 Gene

Variants for LOC728138 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC728138 Gene

Disorders for LOC728138 Gene

No disorders were found for LOC728138 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC728138 Gene

Publications for LOC728138 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 13
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC728138 Gene

Products for LOC728138 Gene

Sources for LOC728138 Gene