Aliases for LOC728095 Gene

Subcategory (RNA class) for LOC728095 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC728095 Gene

  • Uncharacterized LOC728095 3
  • Novel Transcript 5
  • HSALNG0046458 167
  • NONHSAG042183 92
  • Lnc-FBLL1-4 168
  • AC011389.1 5

External Ids for LOC728095 Gene

Previous GeneCards Identifiers for LOC728095 Gene

  • GC05P168372
  • GC05P168440

Summaries for LOC728095 Gene

GeneCards Summary for LOC728095 Gene

LOC728095 (Uncharacterized LOC728095) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC728095 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC728095 Gene

Genomics for LOC728095 Gene

GeneHancer (GH) Regulatory Elements for LOC728095 Gene

Promoters and enhancers for LOC728095 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC728095 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC728095 gene promoter:
  • AML1a
  • Chx10
  • HNF-3beta
  • Nkx3-1
  • Nkx3-1 v1
  • Nkx3-1 v2
  • Pax-4a
  • POU6F1 (c2)
  • S8
  • TGIF

Genomic Locations for LOC728095 Gene

Genomic Locations for LOC728095 Gene
chr5:169,013,067-169,039,476
(GRCh38/hg38)
Size:
26,410 bases
Orientation:
Plus strand
chr5:168,440,232-168,465,003
(GRCh37/hg19)
Size:
24,772 bases
Orientation:
Plus strand

Genomic View for LOC728095 Gene

Genes around LOC728095 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC728095 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC728095 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC728095 Gene

Proteins for LOC728095 Gene

Post-translational modifications for LOC728095 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC728095 Gene

Domains & Families for LOC728095 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC728095 Gene

Function for LOC728095 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC728095 Gene

Localization for LOC728095 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC728095 Gene

Pathways & Interactions for LOC728095 Gene

PathCards logo

SuperPathways for LOC728095 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC728095 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC728095 Gene

Drugs & Compounds for LOC728095 Gene

No Compound Related Data Available

Transcripts for LOC728095 Gene

mRNA/cDNA for LOC728095 Gene

20 RNACentral transcripts :
1 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :
10 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
12 NONCODE transcripts :
8 LncBook transcripts :
25 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC728095 Gene

No ASD Table

Relevant External Links for LOC728095 Gene

GeneLoc Exon Structure for
LOC728095

Expression for LOC728095 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC728095 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC728095

SOURCE GeneReport for Unigene cluster for LOC728095 Gene:

Hs.145601
genes like me logo Genes that share expression patterns with LOC728095: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC728095 Gene

Orthologs for LOC728095 Gene

Evolution for LOC728095 Gene

ENSEMBL:
Gene Tree for LOC728095 (if available)
TreeFam:
Gene Tree for LOC728095 (if available)

No data available for Orthologs for LOC728095 Gene

Paralogs for LOC728095 Gene

No data available for Paralogs for LOC728095 Gene

Variants for LOC728095 Gene

Additional dbSNP identifiers (rs#s) for LOC728095 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC728095 Gene

Disorders for LOC728095 Gene

No disorders were found for LOC728095 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC728095 Gene

Publications for LOC728095 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

No data available for Mastermind for LOC728095 Gene

Products for LOC728095 Gene

Sources for LOC728095 Gene