Aliases for LOC727803 Gene

Aliases for LOC727803 Gene

  • RAN Binding Protein 1 Pseudogene 3

External Ids for LOC727803 Gene

Previous GeneCards Identifiers for LOC727803 Gene

  • GC12M075901
  • GC12M077377

Summaries for LOC727803 Gene

GeneCards Summary for LOC727803 Gene

LOC727803 (RAN Binding Protein 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC727803 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC727803 Gene

Genomics for LOC727803 Gene

GeneHancer (GH) Regulatory Elements for LOC727803 Gene

Promoters and enhancers for LOC727803 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J076983 Enhancer 0.2 FANTOM5 750.6 +0.7 722 0.3 ENSG00000257199 LOC727803 lnc-E2F7-5 piR-38051-072
GH12J076965 Enhancer 0.7 Ensembl ENCODE 0.4 +19.3 19268 3.2 POU5F1 MAFK ZNF316 CEBPG ATF2 MAFF EMSY ENSG00000257199 lnc-E2F7-5 LOC727803 piR-38051-072
GH12J076953 Enhancer 0.7 Ensembl ENCODE 0.3 +31.3 31318 0.5 CTCF ZNF217 PRDM1 CTBP1 PKNOX1 RAD21 RCOR1 piR-38051-072 LOC727803 ENSG00000257199 lnc-E2F7-5
GH12J076942 Enhancer 0.5 Ensembl 0.3 +40.9 40937 2.9 PKNOX1 POLR2A ZNF512 GATA3 ZNF366 JUND piR-38051-072 LOC727803 lnc-E2F7-5 ENSG00000257199
GH12J076967 Enhancer 0.3 Ensembl 0.4 +17.0 16968 1 SCRT2 ENSG00000257199 lnc-E2F7-5 LOC727803 piR-38051-072
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC727803 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC727803 gene promoter:
  • FOXD1
  • NF-AT
  • NF-AT1
  • NF-AT2
  • NF-AT3
  • NF-AT4
  • POU3F1
  • Sp1
  • STAT3
  • YY1

Genomic Locations for LOC727803 Gene

Genomic Locations for LOC727803 Gene
chr12:76,984,238-76,984,669
(GRCh38/hg38)
Size:
432 bases
Orientation:
Minus strand
chr12:77,377,859-77,378,506
(GRCh37/hg19)
Size:
648 bases
Orientation:
Minus strand

Genomic View for LOC727803 Gene

Genes around LOC727803 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC727803 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC727803 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC727803 Gene

Proteins for LOC727803 Gene

Post-translational modifications for LOC727803 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC727803 Gene

Domains & Families for LOC727803 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC727803 Gene

Function for LOC727803 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC727803 Gene

Localization for LOC727803 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC727803 Gene

Pathways & Interactions for LOC727803 Gene

PathCards logo

SuperPathways for LOC727803 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC727803 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC727803 Gene

Drugs & Compounds for LOC727803 Gene

No Compound Related Data Available

Transcripts for LOC727803 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC727803 Gene

No ASD Table

Relevant External Links for LOC727803 Gene

GeneLoc Exon Structure for
LOC727803

No data available for mRNA/cDNA for LOC727803 Gene

Expression for LOC727803 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC727803 Gene

mRNA differential expression in normal tissues according to GTEx for LOC727803 Gene

This gene is overexpressed in Testis (x52.2).
genes like me logo Genes that share expression patterns with LOC727803: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC727803 Gene

Orthologs for LOC727803 Gene

No data available for Orthologs and Evolution for LOC727803 Gene

Paralogs for LOC727803 Gene

No data available for Paralogs for LOC727803 Gene

Variants for LOC727803 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC727803 Gene

Disorders for LOC727803 Gene

No disorders were found for LOC727803 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC727803 Gene

Publications for LOC727803 Gene

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3 56

No data available for External Links for LOC727803 Gene

Products for LOC727803 Gene

Sources for LOC727803 Gene