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LOC654780 (Splicing Factor Proline/Glutamine-Rich) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH16J084196 | Enhancer | 0.5 | Ensembl CraniofacialAtlas | 612.4 | +0.2 | 152 | 1 | FOXA1 DPF2 | LOC654780 ADAD2 KCNG4 | |
GH16J084195 | Enhancer | 0.3 | Ensembl | 620 | +1.1 | 1052 | 0.4 | MNT | LOC654780 ADAD2 KCNG4 | |
GH16J084183 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE CraniofacialAtlas | 17.4 | +11.4 | 11412 | 4.1 | HNRNPL CREB1 GATAD2A CTCF ZBTB33 TFE3 NFKBIZ POLR2A RCOR2 BACH1 | TAF1C lnc-KCNG4-3 lnc-KCNG4-4 LOC654780 ADAD2 HSDL1 DNAAF1 | |
GH16J084193 | Promoter/Enhancer | 0.8 | Ensembl ENCODE | 19.6 | +2.8 | 2806 | 1.5 | CTCF POLR2A SMARCA4 RAD21 | LOC654780 ADAD2 TAF1C KCNG4 | |
GH16J083968 | Promoter/Enhancer | 1.9 | EPDnew Ensembl CraniofacialAtlas dbSUPER | 5.5 | +228.5 | 228454 | 1.2 | CTCF TARDBP MTA2 PKNOX1 MTA1 PATZ1 REST GATAD2B ZNF792 ZNF140 | NECAB2 TAF1C ENSG00000261243 KLHL36 MBTPS1 CRISPLD2 MEAK7 ENSG00000260859 HSDL1 LOC654780 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000057625_9606 | lncRNA | 2551 | 4 |
RefSeq: NR_147175, Ensembl: ENST00000565643 (view in UCSC) , LNCipedia: lnc-TAF1C-1:2, NONCODE: NONHSAT144053.2, |
URS00004A4622_9606 | lncRNA | 575 | 4 |
Ensembl: ENST00000569834 (view in UCSC) , LncBook: HSALNT0234477, LNCipedia: lnc-TAF1C-1:3, NONCODE: NONHSAT144055.2, |
URS0000036FE3_9606 | lncRNA | 453 | 4 |
Ensembl: ENST00000561900 (view in UCSC) , LncBook: HSALNT0234473, LNCipedia: lnc-TAF1C-1:4, NONCODE: NONHSAT144054.2, |
URS00001741FD_9606 | lncRNA | 2689 | 3 |
Ensembl: ENST00000536986 (view in UCSC) , LNCipedia: lnc-TAF1C-1:1, NONCODE: NONHSAT144052.2, |
No disorders were found for LOC654780 Gene.