LOC652549 Gene (Pseudogene)

SNW Domain Containing 1 Pseudogene

GC01P078749
GIFtS:
3
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Aliases for LOC652549 Gene

Aliases for LOC652549 Gene

  • SNW Domain Containing 1 Pseudogene 3

External Ids for LOC652549 Gene

Previous GeneCards Identifiers for LOC652549 Gene

  • GC01P078982
  • GC01P079210

Summaries for LOC652549 Gene

GeneCards Summary for LOC652549 Gene

LOC652549 (SNW Domain Containing 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC652549 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC652549 Gene

Genomics for LOC652549 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC652549 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J078750 Enhancer 0.3 FANTOM5 250.7 +1.2 1195 0.4 ENSG00000235400 LOC652549 HSALNG0004635 IFI44 ADGRL4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC652549 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC652549 Gene

Latest Assembly
chr1:78,749,072-78,750,856
(GRCh38/hg38)
Size:
1,785 bases
Orientation:
Plus strand

Previous Assembly
chr1:79,214,757-79,216,541
(GRCh37/hg19 by Entrez Gene)
Size:
1,785 bases
Orientation:
Plus strand

Genomic View for LOC652549 Gene

Genes around LOC652549 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC652549 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC652549 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC652549 Gene

Proteins for LOC652549 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for LOC652549 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC652549 Gene

Domains & Families for LOC652549 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC652549 Gene

Function for LOC652549 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes for LOC652549 Gene

GenomeRNAi human phenotypes for LOC652549:
genes like me logo Genes that share phenotypes with LOC652549: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC652549 Gene

Localization for LOC652549 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC652549 Gene

Pathways & Interactions for LOC652549 Gene

PathCards logo

SuperPathways for LOC652549 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC652549 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC652549 Gene

Drugs & Compounds for LOC652549 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC652549 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Alternative Splicing Database (ASD) splice patterns (SP) for LOC652549 Gene

No ASD Table

Relevant External Links for LOC652549 Gene

GeneLoc Exon Structure for
LOC652549

No data available for mRNA/cDNA for LOC652549 Gene

Expression for LOC652549 Gene

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  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC652549 Gene

mRNA expression in normal human tissues for LOC652549 Gene
mRNA expression by GTEx for LOC652549 Gene
genes like me logo Genes that share expression patterns with LOC652549: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC652549 Gene

Orthologs for LOC652549 Gene

No data available for Orthologs and Evolution for LOC652549 Gene

Paralogs for LOC652549 Gene

No data available for Paralogs for LOC652549 Gene

Variants for LOC652549 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC652549 Gene

Disorders for LOC652549 Gene

No disorders were found for LOC652549 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC652549 Gene

Publications for LOC652549 Gene

No publications were found for LOC652549 Gene.

No data available for Mastermind for LOC652549 Gene

Products for LOC652549 Gene

Sources for LOC652549 Gene