Aliases for LOC649352 Gene

Aliases for LOC649352 Gene

  • Ubiquitin Carboxyl-Terminal Hydrolase 17-Like Protein 2-Like 3
  • Ubiquitin Carboxyl-Terminal Hydrolase 17-Like Pseudogene 3

External Ids for LOC649352 Gene

Previous GeneCards Identifiers for LOC649352 Gene

  • GC08M012280
  • GC08U901268
  • GC08M010926
  • GC08M012237
  • GC08M012378
  • GC08M012382

Summaries for LOC649352 Gene

GeneCards Summary for LOC649352 Gene

LOC649352 (Ubiquitin Carboxyl-Terminal Hydrolase 17-Like Protein 2-Like) is a Pseudogene.

Additional gene information for LOC649352 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC649352 Gene

Genomics for LOC649352 Gene

Genomic Locations for LOC649352 Gene

Latest Assembly
chr8:12,379,267-12,379,789
(GRCh38/hg38)
Size:
523 bases
Orientation:
Minus strand

Previous Assembly
chr8:12,236,776-12,237,298
(GRCh37/hg19 by Entrez Gene)
Size:
523 bases
Orientation:
Minus strand

Alternative Locations (GRCh38/hg38)

  • chr8(ALT_REF_LOCI_1):24,524-25,046 (+)
  • chr8(PATCHES):1,208,687-1,209,209 (+)

Genomic View for LOC649352 Gene

Genes around LOC649352 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC649352 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC649352 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC649352 Gene

No data available for GeneHancer (GH) Regulatory Elements for LOC649352 Gene

Proteins for LOC649352 Gene

Post-translational modifications for LOC649352 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC649352 Gene

Domains & Families for LOC649352 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC649352 Gene

Function for LOC649352 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC649352 Gene

Localization for LOC649352 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC649352 Gene

Pathways & Interactions for LOC649352 Gene

PathCards logo

SuperPathways for LOC649352 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC649352 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC649352 Gene

Drugs & Compounds for LOC649352 Gene

No Compound Related Data Available

Transcripts for LOC649352 Gene

mRNA/cDNA for LOC649352 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC649352 Gene

No ASD Table

Relevant External Links for LOC649352 Gene

GeneLoc Exon Structure for
LOC649352

Expression for LOC649352 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC649352 Gene

mRNA differential expression in normal tissues according to GTEx for LOC649352 Gene

This gene is overexpressed in Brain - Cerebellum (x6.0) and Brain - Cortex (x4.0).

SOURCE GeneReport for Unigene cluster for LOC649352 Gene:

Hs.742474
genes like me logo Genes that share expression patterns with LOC649352: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC649352 Gene

Orthologs for LOC649352 Gene

No data available for Orthologs and Evolution for LOC649352 Gene

Paralogs for LOC649352 Gene

No data available for Paralogs for LOC649352 Gene

Variants for LOC649352 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC649352 Gene

Variant ID Type Subtype PubMed ID
dgv1172n67 CNV gain 20364138
dgv11967n54 CNV gain 21841781
dgv11968n54 CNV gain 21841781
dgv11970n54 CNV loss 21841781
dgv11971n54 CNV loss 21841781
dgv11972n54 CNV loss 21841781
dgv11974n54 CNV loss 21841781
dgv11975n54 CNV loss 21841781
dgv11976n54 CNV loss 21841781
dgv11977n54 CNV loss 21841781
dgv11978n54 CNV loss 21841781
dgv11979n54 CNV loss 21841781
dgv11980n54 CNV loss 21841781
dgv11981n54 CNV loss 21841781
dgv1270e199 CNV deletion 23128226
dgv140n17 CNV loss 16327808
dgv154e203 CNV gain+loss 21179565
dgv244e55 CNV gain 17911159
dgv245e55 CNV gain 17911159
dgv246e55 CNV gain 17911159
dgv263n111 CNV deletion 26073780
dgv264n111 CNV duplication 26073780
dgv3775n106 CNV deletion 24896259
dgv4082e59 CNV duplication 20981092
dgv7015n100 CNV gain 25217958
dgv7016n100 CNV gain 25217958
dgv7017n100 CNV gain 25217958
dgv7018n100 CNV gain+loss 25217958
dgv7019n100 CNV gain 25217958
dgv7020n100 CNV loss 25217958
dgv7021n100 CNV loss 25217958
dgv7025n100 CNV gain 25217958
dgv7026n100 CNV gain+loss 25217958
dgv7029n100 CNV gain+loss 25217958
dgv7030n100 CNV gain 25217958
dgv7031n100 CNV loss 25217958
dgv7032n100 CNV gain 25217958
dgv7033n100 CNV gain 25217958
dgv7034n100 CNV gain+loss 25217958
dgv7035n100 CNV loss 25217958
dgv7036n100 CNV gain 25217958
dgv7037n100 CNV loss 25217958
dgv7038n100 CNV loss 25217958
dgv7039n100 CNV gain+loss 25217958
dgv7040n100 CNV gain 25217958
dgv7041n100 CNV gain+loss 25217958
dgv7042n100 CNV loss 25217958
dgv7043n100 CNV gain 25217958
dgv7044n100 CNV loss 25217958
dgv7045n100 CNV gain+loss 25217958
dgv7046n100 CNV gain+loss 25217958
dgv7047n100 CNV gain+loss 25217958
dgv7048n100 CNV loss 25217958
dgv7049n100 CNV gain 25217958
dgv7050n100 CNV gain+loss 25217958
dgv7051n100 CNV gain 25217958
dgv7052n100 CNV gain+loss 25217958
dgv7053n100 CNV loss 25217958
dgv7054n100 CNV gain 25217958
dgv7055n100 CNV gain+loss 25217958
dgv7056n100 CNV gain 25217958
dgv7057n100 CNV loss 25217958
dgv7058n100 CNV loss 25217958
dgv7059n100 CNV loss 25217958
dgv7060n100 CNV loss 25217958
esv25198 CNV gain+loss 19812545
esv2672709 CNV deletion 23128226
esv2736614 CNV deletion 23290073
esv2759593 CNV gain+loss 17122850
esv32998 CNV gain+loss 17666407
esv3403420 CNV duplication 20981092
esv3891340 CNV loss 25118596
esv3891341 CNV gain 25118596
esv993011 CNV gain 20482838
nsv1019015 CNV gain 25217958
nsv1029157 CNV gain 25217958
nsv1032062 CNV gain 25217958
nsv1032964 CNV gain 25217958
nsv1034659 CNV loss 25217958
nsv1161719 CNV deletion 26073780
nsv428195 CNV gain 18775914
nsv438036 CNV loss 16468122
nsv442421 CNV gain+loss 18776908
nsv469553 CNV loss 16826518
nsv471652 CNV gain+loss 15918152
nsv511387 CNV loss 21212237
nsv515065 CNV gain 21397061
nsv516685 CNV gain+loss 19592680
nsv821220 CNV deletion 20802225
nsv821657 CNV loss 15273396
nsv824539 CNV gain 20364138
nsv824540 CNV loss 20364138
nsv8288 CNV gain+loss 18304495
nsv831234 CNV loss 17160897
nsv831235 CNV loss 17160897
nsv967566 CNV duplication 23825009

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Variation tolerance and Additional Variant Information for LOC649352 Gene

Disorders for LOC649352 Gene

No disorders were found for LOC649352 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC649352 Gene

Publications for LOC649352 Gene

  1. The deubiquitinating enzyme USP17 is essential for GTPase subcellular localization and cell motility. (PMID: 21448158) de la Vega M … Johnston JA (Nature communications 2011) 3
  2. Lys-63-specific deubiquitination of SDS3 by USP17 regulates HDAC activity. (PMID: 21239494) Ramakrishna S … Baek KH (The Journal of biological chemistry 2011) 3
  3. Ubiquitin hydrolase Dub3 promotes oncogenic transformation by stabilizing Cdc25A. (PMID: 20228808) Pereg Y … Dixit VM (Nature cell biology 2010) 3
  4. Cdc25A and Dub3 in a high-stakes balancing act. (PMID: 20228807) Hayes SD … Harper JW (Nature cell biology 2010) 3
  5. The ubiquitin-specific protease 17 is involved in virus-triggered type I IFN signaling. (PMID: 20368735) Chen R … Shu HB (Cell research 2010) 3

No data available for Mastermind for LOC649352 Gene

Products for LOC649352 Gene

Sources for LOC649352 Gene