Aliases for LOC648987 Gene

Subcategory (RNA class) for LOC648987 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC648987 Gene

  • Uncharacterized LOC648987 3
  • LOC648987 Protein 13
  • CTD-2201E18.3 3
  • HSALNG0041486 167
  • NONHSAG040296 92
  • Lnc-ANXA2R-1 168

External Ids for LOC648987 Gene

Previous GeneCards Identifiers for LOC648987 Gene

  • GC05M043051
  • GC05M043016
  • GC05M043019
  • GC05M043020
  • GC05M043031
  • GC05M043025

Summaries for LOC648987 Gene

GeneCards Summary for LOC648987 Gene

LOC648987 (Uncharacterized LOC648987) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC648987 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC648987 Gene

Genomics for LOC648987 Gene

GeneHancer (GH) Regulatory Elements for LOC648987 Gene

Promoters and enhancers for LOC648987 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC648987 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC648987 Gene

Genomic Locations for LOC648987 Gene
chr5:43,014,729-43,067,439
(GRCh38/hg38)
Size:
52,711 bases
Orientation:
Minus strand
chr5:43,014,516-43,067,521
(GRCh37/hg19)
Size:
53,006 bases
Orientation:
Minus strand

Genomic View for LOC648987 Gene

Genes around LOC648987 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC648987 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC648987 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC648987 Gene

Proteins for LOC648987 Gene

  • Protein details for LOC648987 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q8N4J7-Q8N4J7_HUMAN
    Recommended name:
    LOC648987 protein
    Protein Accession:
    Q8N4J7

    Protein attributes for LOC648987 Gene

    Size:
    145 amino acids
    Molecular mass:
    16132 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LOC648987 Gene

Post-translational modifications for LOC648987 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC648987 Gene

Domains & Families for LOC648987 Gene

Protein Domains for LOC648987 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for LOC648987 Gene

GenScript: Design optimal peptide antigens:
  • LOC648987 protein (Q8N4J7_HUMAN)
genes like me logo Genes that share domains with LOC648987: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC648987 Gene

Function for LOC648987 Gene

Phenotypes From GWAS Catalog for LOC648987 Gene

Phenotypes for LOC648987 Gene

GenomeRNAi human phenotypes for LOC648987:
genes like me logo Genes that share phenotypes with LOC648987: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC648987 Gene

Localization for LOC648987 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC648987 Gene

Pathways & Interactions for LOC648987 Gene

PathCards logo

SuperPathways for LOC648987 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC648987 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC648987 Gene

Drugs & Compounds for LOC648987 Gene

No Compound Related Data Available

Transcripts for LOC648987 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC648987 Gene

No ASD Table

Relevant External Links for LOC648987 Gene

GeneLoc Exon Structure for
LOC648987

Expression for LOC648987 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC648987 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC648987

SOURCE GeneReport for Unigene cluster for LOC648987 Gene:

Hs.649468
genes like me logo Genes that share expression patterns with LOC648987: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC648987 Gene

Orthologs for LOC648987 Gene

No data available for Orthologs and Evolution for LOC648987 Gene

Paralogs for LOC648987 Gene

No data available for Paralogs for LOC648987 Gene

Variants for LOC648987 Gene

Additional dbSNP identifiers (rs#s) for LOC648987 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC648987 Gene

Variant ID Type Subtype PubMed ID
esv1236120 CNV insertion 17803354
esv1664146 CNV insertion 17803354
nsv1029288 CNV loss 25217958
nsv1073453 CNV deletion 25765185
nsv1161235 CNV deletion 26073780
nsv327225 CNV insertion 16902084
nsv462126 CNV gain 19166990
nsv597925 CNV gain 21841781
nsv950674 CNV deletion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC648987 Gene

Disorders for LOC648987 Gene

No disorders were found for LOC648987 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC648987 Gene

Publications for LOC648987 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 13 54
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 54

No data available for Mastermind for LOC648987 Gene

Products for LOC648987 Gene

Sources for LOC648987 Gene