Aliases for LOC646995 Gene

Aliases for LOC646995 Gene

  • Tripartite Motif-Containing Protein 38-Like 3

External Ids for LOC646995 Gene

Previous GeneCards Identifiers for LOC646995 Gene

  • GC04P166804
  • GC04P166585

Summaries for LOC646995 Gene

GeneCards Summary for LOC646995 Gene

LOC646995 (Tripartite Motif-Containing Protein 38-Like) is a Pseudogene.

Additional gene information for LOC646995 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC646995 Gene

Genomics for LOC646995 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC646995 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J165662 Enhancer 0.4 Ensembl ENCODE 600.7 -1.6 -1562 1.4 RXRA ENSG00000250725 LOC646995 lnc-CPE-3 ENSG00000287424 lnc-CPE-2 TLL1 CPE
GH04J165657 Enhancer 0.6 Ensembl ENCODE 0.4 -7.4 -7445 2.2 FOXA1 GATA3 NANOG POU5F1 LOC646995 lnc-CPE-2 ENSG00000287424 TLL1 CPE
GH04J165621 Enhancer 0.6 Ensembl ENCODE 0.3 -41.5 -41545 2.4 FOXA1 NFE2 MAFG GATA3 JUN EMSY LOC646995 lnc-CPE-2 TLL1 CPE
GH04J165579 Enhancer 0.7 Ensembl ENCODE 0.2 -83.7 -83679 2.4 ZIC2 JUN FOSL2 ZNF335 HIC1 TRIM28 JUND CTBP1 ZNF547 SP7 TLL1 lnc-CPE-2 LOC646995 CPE
GH04J165624 Enhancer 0.3 Ensembl 0.3 -39.8 -39845 0.2 MAFF MAFK LOC646995 lnc-CPE-2 TLL1 CPE
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC646995 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC646995 Gene

Genomic Locations for LOC646995 Gene
chr4:165,664,346-165,665,735
(GRCh38/hg38)
Size:
1,390 bases
Orientation:
Plus strand
chr4:166,585,244-166,586,823
(GRCh37/hg19)
Size:
1,580 bases
Orientation:
Plus strand

Genomic View for LOC646995 Gene

Genes around LOC646995 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC646995 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC646995 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC646995 Gene

Proteins for LOC646995 Gene

Post-translational modifications for LOC646995 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC646995 Gene

Domains & Families for LOC646995 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC646995 Gene

Function for LOC646995 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC646995 Gene

Localization for LOC646995 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC646995 Gene

Pathways & Interactions for LOC646995 Gene

PathCards logo

SuperPathways for LOC646995 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC646995 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC646995 Gene

Drugs & Compounds for LOC646995 Gene

No Compound Related Data Available

Transcripts for LOC646995 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC646995 Gene

No ASD Table

Relevant External Links for LOC646995 Gene

GeneLoc Exon Structure for
LOC646995

No data available for mRNA/cDNA for LOC646995 Gene

Expression for LOC646995 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC646995 Gene

genes like me logo Genes that share expression patterns with LOC646995: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC646995 Gene

Orthologs for LOC646995 Gene

No data available for Orthologs and Evolution for LOC646995 Gene

Paralogs for LOC646995 Gene

No data available for Paralogs for LOC646995 Gene

Variants for LOC646995 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC646995 Gene

Disorders for LOC646995 Gene

No disorders were found for LOC646995 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC646995 Gene

Publications for LOC646995 Gene

No publications were found for LOC646995 Gene.

No data available for Mastermind for LOC646995 Gene

Products for LOC646995 Gene

Sources for LOC646995 Gene