Aliases for LOC646804 Gene

Aliases for LOC646804 Gene

  • Alkylated DNA Repair Protein AlkB Homolog 8-Like 3
  • Novel Pseudogene 5
  • BX284613.1 5

External Ids for LOC646804 Gene

Previous GeneCards Identifiers for LOC646804 Gene

  • GC01P169260
  • GC01P169312
  • GC01P171046

Summaries for LOC646804 Gene

GeneCards Summary for LOC646804 Gene

LOC646804 (Alkylated DNA Repair Protein AlkB Homolog 8-Like) is a Pseudogene.

Additional gene information for LOC646804 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC646804 Gene

Genomics for LOC646804 Gene

GeneHancer (GH) Regulatory Elements for LOC646804 Gene

Promoters and enhancers for LOC646804 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J171081 Enhancer 0.7 Ensembl ENCODE 750.6 -1.0 -1017 2.5 CTCF RAD21 SP1 USF1 YY1 HNF4A MAFK RXRA MAX LOC646804 FMO3 ENSG00000271811 piR-32810-009 ENSG00000231424
GH01J171084 Enhancer 0.5 Ensembl 750.6 +1.0 1040 0.4 SP1 JUND YY1 ZBTB33 HNF4A REST RXRA ATF3 MAX LOC646804 FMO3 ENSG00000231424
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC646804 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC646804 gene promoter:
  • C/EBPalpha
  • FOXL1
  • Gfi-1
  • HNF-1
  • HNF-1A
  • Msx-1
  • Pbx1a
  • RORalpha2

Genomic Locations for LOC646804 Gene

Genomic Locations for LOC646804 Gene
chr1:171,083,561-171,085,205
(GRCh38/hg38)
Size:
1,645 bases
Orientation:
Plus strand
chr1:171,052,702-171,054,346
(GRCh37/hg19)
Size:
1,645 bases
Orientation:
Plus strand

Genomic View for LOC646804 Gene

Genes around LOC646804 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC646804 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC646804 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC646804 Gene

Proteins for LOC646804 Gene

Post-translational modifications for LOC646804 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC646804 Gene

Domains & Families for LOC646804 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC646804 Gene

Function for LOC646804 Gene

Phenotypes for LOC646804 Gene

genes like me logo Genes that share phenotypes with LOC646804: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC646804 Gene

Localization for LOC646804 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC646804 Gene

Pathways & Interactions for LOC646804 Gene

PathCards logo

SuperPathways for LOC646804 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC646804 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC646804 Gene

Drugs & Compounds for LOC646804 Gene

No Compound Related Data Available

Transcripts for LOC646804 Gene

mRNA/cDNA for LOC646804 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC646804 Gene

No ASD Table

Relevant External Links for LOC646804 Gene

GeneLoc Exon Structure for
LOC646804

Expression for LOC646804 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC646804 Gene

genes like me logo Genes that share expression patterns with LOC646804: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC646804 Gene

Orthologs for LOC646804 Gene

Evolution for LOC646804 Gene

ENSEMBL:
Gene Tree for LOC646804 (if available)
TreeFam:
Gene Tree for LOC646804 (if available)

No data available for Orthologs for LOC646804 Gene

Paralogs for LOC646804 Gene

No data available for Paralogs for LOC646804 Gene

Variants for LOC646804 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC646804 Gene

Disorders for LOC646804 Gene

No disorders were found for LOC646804 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC646804 Gene

Publications for LOC646804 Gene

No publications were found for LOC646804 Gene.

No data available for External Links for LOC646804 Gene

Products for LOC646804 Gene

Sources for LOC646804 Gene