Aliases for LOC646708 Gene

Aliases for LOC646708 Gene

  • DnaJ Heat Shock Protein Family (Hsp40) Member C5 Pseudogene 3
  • DnaJ (Hsp40) Homolog, Subfamily C, Member 5 Pseudogene 3

External Ids for LOC646708 Gene

Previous GeneCards Identifiers for LOC646708 Gene

  • GC08U900680
  • GC08M023392
  • GC08M023340

Summaries for LOC646708 Gene

GeneCards Summary for LOC646708 Gene

LOC646708 (DnaJ Heat Shock Protein Family (Hsp40) Member C5 Pseudogene) is a Pseudogene.

Additional gene information for LOC646708 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC646708 Gene

Genomics for LOC646708 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC646708 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J023483 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.9 -885 8.8 ZNF512 IKZF1 JUND PRDM1 PKNOX1 REST HDAC1 ETV6 CTCF HMBOX1 ENSG00000253483 LOC646708 piR-32485 piR-30349 SLC25A37 ENTPD4 ENSG00000253390 NKX3-1 TNFRSF10C ENSG00000287166
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC646708 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC646708 Gene

Genomic Locations for LOC646708 Gene
chr8:23,480,987-23,483,716
(GRCh38/hg38)
Size:
2,730 bases
Orientation:
Minus strand
chr8:23,338,698-23,341,198
(GRCh37/hg19)
Size:
2,501 bases
Orientation:
Minus strand

Genomic View for LOC646708 Gene

Genes around LOC646708 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC646708 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC646708 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC646708 Gene

Proteins for LOC646708 Gene

Post-translational modifications for LOC646708 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC646708 Gene

Domains & Families for LOC646708 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC646708 Gene

Function for LOC646708 Gene

Phenotypes From GWAS Catalog for LOC646708 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC646708 Gene

Localization for LOC646708 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC646708 Gene

Pathways & Interactions for LOC646708 Gene

PathCards logo

SuperPathways for LOC646708 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC646708 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC646708 Gene

Drugs & Compounds for LOC646708 Gene

No Compound Related Data Available

Transcripts for LOC646708 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC646708 Gene

No ASD Table

Relevant External Links for LOC646708 Gene

GeneLoc Exon Structure for
LOC646708

No data available for mRNA/cDNA for LOC646708 Gene

Expression for LOC646708 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC646708 Gene

mRNA differential expression in normal tissues according to GTEx for LOC646708 Gene

This gene is overexpressed in Whole Blood (x15.4) and Pancreas (x5.8).
genes like me logo Genes that share expression patterns with LOC646708: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC646708 Gene

Orthologs for LOC646708 Gene

No data available for Orthologs and Evolution for LOC646708 Gene

Paralogs for LOC646708 Gene

No data available for Paralogs for LOC646708 Gene

Variants for LOC646708 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC646708 Gene

Disorders for LOC646708 Gene

No disorders were found for LOC646708 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC646708 Gene

Publications for LOC646708 Gene

No publications were found for LOC646708 Gene.

No data available for Mastermind for LOC646708 Gene

Products for LOC646708 Gene

Sources for LOC646708 Gene