Aliases for LOC646029 Gene

Subcategory (RNA class) for LOC646029 Gene


Number of RNA Genes sources:

3 / 14

Aliases for LOC646029 Gene

  • Uncharacterized LOC646029 3
  • HSALNG0085914 167
  • NONHSAG009159 92
  • Lnc-AQP11-1 168

External Ids for LOC646029 Gene

Previous GeneCards Identifiers for LOC646029 Gene

  • GC11U902279

Summaries for LOC646029 Gene

GeneCards Summary for LOC646029 Gene

LOC646029 (Uncharacterized LOC646029) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC646029 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC646029 Gene

Genomics for LOC646029 Gene

GeneHancer (GH) Regulatory Elements for LOC646029 Gene

Promoters and enhancers for LOC646029 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J077547 Enhancer 0.8 Ensembl ENCODE 0.7 -2.0 -2007 2.4 CTCF TEAD4 REST RAD21 TRIM22 SMC3 BRCA1 ZNF654 CHD1 PRDM6 INTS4 AAMDC LOC646029 piR-55985-026 lnc-CLNS1A-3 CLNS1A
GH11J077557 Enhancer 1 Ensembl ENCODE 0.4 +9.3 9332 4.7 CTCF JUND FOS TOE1 RAD21 EP300 CTBP1 MYC SMARCC1 SMC3 AQP11 MYO7A AAMDC INTS4 CLNS1A piR-53338-025 RF00066-038 LOC646029 lnc-CLNS1A-3
GH11J077568 Enhancer 0.6 Ensembl ENCODE 0.4 +18.4 18364 1.8 ZNF316 MAFF MAFK MAFG EMSY RF00066-038 RNU7-59P AAMDC lnc-RSF1-1 LOC646029 lnc-CLNS1A-3 CLNS1A
GH11J077542 Enhancer 0.4 Ensembl 0.4 -8.1 -8135 0.8 JUND FOS STAT3 AAMDC LOC646029 piR-55985-026 lnc-CLNS1A-3 CLNS1A
GH11J077570 Enhancer 0.3 Ensembl ENCODE 0.4 +21.4 21422 2.5 INTS4 CLNS1A AAMDC AQP11 PAK1 MYO7A RNU7-59P lnc-RSF1-1 LOC646029 lnc-CLNS1A-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC646029 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC646029 Gene

Genomic Locations for LOC646029 Gene
29,197 bases
Plus strand

Genomic View for LOC646029 Gene

Genes around LOC646029 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC646029 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC646029 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC646029 Gene

Proteins for LOC646029 Gene

Post-translational modifications for LOC646029 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC646029 Gene

Domains & Families for LOC646029 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC646029 Gene

Function for LOC646029 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC646029 Gene

Localization for LOC646029 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC646029 Gene

Pathways & Interactions for LOC646029 Gene

PathCards logo

SuperPathways for LOC646029 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC646029 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC646029 Gene

Drugs & Compounds for LOC646029 Gene

No Compound Related Data Available

Transcripts for LOC646029 Gene

mRNA/cDNA for LOC646029 Gene

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC646029

Alternative Splicing Database (ASD) splice patterns (SP) for LOC646029 Gene

No ASD Table

Relevant External Links for LOC646029 Gene

GeneLoc Exon Structure for

Expression for LOC646029 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC646029

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC646029 Gene

Orthologs for LOC646029 Gene

No data available for Orthologs and Evolution for LOC646029 Gene

Paralogs for LOC646029 Gene

No data available for Paralogs for LOC646029 Gene

Variants for LOC646029 Gene

Additional dbSNP identifiers (rs#s) for LOC646029 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC646029 Gene

Disorders for LOC646029 Gene

No disorders were found for LOC646029 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC646029 Gene

Publications for LOC646029 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC646029 Gene

Products for LOC646029 Gene

Sources for LOC646029 Gene