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Aliases for LOC645485 Gene
Subcategory (RNA class) for LOC645485 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LOC645485 Gene
External Ids for LOC645485 Gene
- Entrez Gene: 645485
- Ensembl: ENSG00000246331
Previous GeneCards Identifiers for LOC645485 Gene
- GC12P030798
- GC12U901030
- GC12P030909
Summaries for LOC645485 Gene
GeneCards Summary for LOC645485 Gene
LOC645485 (Uncharacterized LOC645485) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LOC645485 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC645485 Gene
Genomics for LOC645485 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC645485 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC645485 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC645485 Gene
Genomic Locations for LOC645485 Gene
- chr12:30,755,041-30,780,739
- (GRCh38/hg38)
- Size:
- 25,699 bases
- Orientation:
- Plus strand
- chr12:30,908,008-30,933,673
- (GRCh37/hg19)
- Size:
- 25,666 bases
- Orientation:
- Plus strand
Genomic View for LOC645485 Gene
Genes around LOC645485 on UCSC Golden Path with GeneCards custom track
LOC645485 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 12p11.21 by Entrez Gene
- 12p11.21 by Ensembl
LOC645485 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC645485 Gene
Proteins for LOC645485 Gene
Post-translational modifications for LOC645485 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC645485
- Origene Custom Protein Services for LOC645485
No data available for DME Specific Peptides for LOC645485 Gene
Domains & Families for LOC645485 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC645485 Gene
Function for LOC645485 Gene
Phenotypes From GWAS Catalog for LOC645485 Gene
Phenotypes for LOC645485 Gene
- GenomeRNAi human phenotypes for LOC645485:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LOC645485
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC645485 Gene
Localization for LOC645485 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC645485 Gene
Transcripts for LOC645485 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC645485 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00001DAD49_9606 | lncRNA | 1552 | 4 |
Ensembl: ENST00000500076 (view in UCSC) , LncBook: HSALNT0187299, LNCipedia: lnc-TSPAN11-3:1, NONCODE: NONHSAT027513.2, |
| URS00008C27F1_9606 | lncRNA | 1552 | 1 |
RefSeq: NR_135046, |
| URS00009B3C16_9606 | lncRNA | 1551 | 2 |
LncBook: HSALNT0187300, NONCODE: NONHSAT162012.1, |
| URS0000D595CF_9606 | lncRNA | 2875 | 1 |
LNCipedia: lnc-TSPAN11-3:3, |
| URS00008B6C22_9606 | lncRNA | 1551 | 1 |
LNCipedia: lnc-TSPAN11-3:2, |
LOC645485 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LOC645485 Gene
- 1 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for LOC645485
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC645485 Gene
- GeneLoc Exon Structure for
- LOC645485
Expression for LOC645485 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC645485
SOURCE GeneReport for Unigene cluster for LOC645485 Gene:
Hs.232332Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC645485 Gene
Orthologs for LOC645485 Gene
No data available for Orthologs for LOC645485 Gene
Paralogs for LOC645485 Gene
No data available for Paralogs for LOC645485 Gene
Variants for LOC645485 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC645485 Gene
Disorders for LOC645485 Gene
No disorders were found for LOC645485 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC645485 Gene
Publications for LOC645485 Gene
No publications were found for LOC645485 Gene.
No data available for Mastermind for LOC645485 Gene
Products for LOC645485 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC645485
- Origene Custom Protein Services for LOC645485
- Browse OriGene Inhibitory RNA Products For LOC645485
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC645485
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC645485
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC645485
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC645485
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC645485
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC645485
Sources for LOC645485 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB