Aliases for LOC644909 Gene

Aliases for LOC644909 Gene

  • Ligand Of Numb-Protein X 1, E3 Ubiquitin Protein Ligase Pseudogene 3

External Ids for LOC644909 Gene

Previous GeneCards Identifiers for LOC644909 Gene

  • GC17P017264
  • GC17P017425

Summaries for LOC644909 Gene

GeneCards Summary for LOC644909 Gene

LOC644909 (Ligand Of Numb-Protein X 1, E3 Ubiquitin Protein Ligase Pseudogene) is a Pseudogene.

Additional gene information for LOC644909 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC644909 Gene

Genomics for LOC644909 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC644909 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J017421 Enhancer 0.4 Ensembl dbSUPER 600.7 -0.4 -376 0.6 MNT ENSG00000227158 LOC644909 HSALNG0114944 MED9 NT5M
GH17J017415 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 -5.5 -5459 3.6 HNRNPL GATAD2A PRDM10 TFE3 SIX5 NFKBIZ NFRKB RCOR2 ZHX2 JUND MPRIP-AS1 DRG2 ENSG00000235554 LOC100419436 UPF3AP1 FLCN HSALNG0114944 LOC644909 MED9 NT5M
GH17J017419 Enhancer 0.7 ENCODE dbSUPER 0.7 -2.1 -2073 1.3 SP1 ZNF623 NR2F2 BCOR ZMYM3 ZFP3 KDM1A MAX ZFX SMARCA5 LOC644909 HSALNG0114944 MED9 NT5M
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC644909 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC644909 Gene

Genomic Locations for LOC644909 Gene
chr17:17,422,677-17,423,729
(GRCh38/hg38)
Size:
1,053 bases
Orientation:
Plus strand
chr17:17,325,991-17,327,043
(GRCh37/hg19)
Size:
1,053 bases
Orientation:
Plus strand

Genomic View for LOC644909 Gene

Genes around LOC644909 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC644909 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC644909 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC644909 Gene

Proteins for LOC644909 Gene

Post-translational modifications for LOC644909 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC644909 Gene

Domains & Families for LOC644909 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC644909 Gene

Function for LOC644909 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC644909 Gene

Localization for LOC644909 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC644909 Gene

Pathways & Interactions for LOC644909 Gene

PathCards logo

SuperPathways for LOC644909 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC644909 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC644909 Gene

Drugs & Compounds for LOC644909 Gene

No Compound Related Data Available

Transcripts for LOC644909 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC644909 Gene

No ASD Table

Relevant External Links for LOC644909 Gene

GeneLoc Exon Structure for
LOC644909

No data available for mRNA/cDNA for LOC644909 Gene

Expression for LOC644909 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC644909 Gene

mRNA differential expression in normal tissues according to GTEx for LOC644909 Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (x5.5) and Adipose - Subcutaneous (x4.2).
genes like me logo Genes that share expression patterns with LOC644909: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC644909 Gene

Orthologs for LOC644909 Gene

No data available for Orthologs and Evolution for LOC644909 Gene

Paralogs for LOC644909 Gene

No data available for Paralogs for LOC644909 Gene

Variants for LOC644909 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC644909 Gene

Disorders for LOC644909 Gene

No disorders were found for LOC644909 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC644909 Gene

Publications for LOC644909 Gene

No publications were found for LOC644909 Gene.

No data available for Mastermind for LOC644909 Gene

Products for LOC644909 Gene

Sources for LOC644909 Gene