Aliases for LOC644661 Gene

Aliases for LOC644661 Gene

  • Importin Subunit Alpha-1 Pseudogene 3

External Ids for LOC644661 Gene

Previous GeneCards Identifiers for LOC644661 Gene

  • GC09M108971
  • GC09M109932
  • GC09M079535

Summaries for LOC644661 Gene

GeneCards Summary for LOC644661 Gene

LOC644661 (Importin Subunit Alpha-1 Pseudogene) is a Pseudogene.

Additional gene information for LOC644661 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC644661 Gene

Genomics for LOC644661 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC644661 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J107190 Enhancer 0.6 Ensembl ENCODE 600.7 +0.9 875 1.8 FOS IKZF1 MTA2 JUND GATA2 LOC644661 ENSG00000226535 RAD23B LOC105376204
GH09J107210 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -22.5 -22514 6.6 CEBPG ZNF629 BACH1 JUND LARP7 RELA RXRB IKZF2 TRIM22 ZNF600 KLF4 LOC107987110 LOC644661 RAD23B LOC105376204
GH09J107172 Enhancer 1 Ensembl ENCODE 0.4 +15.7 15659 6.7 CTCF TFE3 BACH1 JUND ZNF143 RXRB POLR2A REST RAD21 IKZF2 ENSG00000226535 RAD23B LOC644661 LOC105376204
GH09J107218 Enhancer 0.8 Ensembl 0.3 -27.9 -27924 1.4 ATF7 STAT3 RELA IKZF2 TRIM22 PKNOX1 ARID3A ELK1 DPF2 RELB LOC107987110 LOC644661 RAD23B LOC105376204
GH09J107188 Enhancer 0.3 Ensembl 0.7 +2.6 2576 0.8 SMARCA4 SP7 LOC644661 ENSG00000226535 RAD23B LOC105376204
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC644661 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC644661 Gene

Genomic Locations for LOC644661 Gene
chr9:107,169,125-107,191,176
(GRCh38/hg38)
Size:
22,052 bases
Orientation:
Minus strand
chr9:109,931,850-109,975,989
(GRCh37/hg19)
Size:
44,140 bases
Orientation:
Minus strand

Genomic View for LOC644661 Gene

Genes around LOC644661 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC644661 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC644661 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC644661 Gene

Proteins for LOC644661 Gene

Post-translational modifications for LOC644661 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC644661 Gene

Domains & Families for LOC644661 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC644661 Gene

Function for LOC644661 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC644661 Gene

Localization for LOC644661 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC644661 Gene

Pathways & Interactions for LOC644661 Gene

PathCards logo

SuperPathways for LOC644661 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC644661 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC644661 Gene

Drugs & Compounds for LOC644661 Gene

No Compound Related Data Available

Transcripts for LOC644661 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC644661 Gene

No ASD Table

Relevant External Links for LOC644661 Gene

GeneLoc Exon Structure for
LOC644661

No data available for mRNA/cDNA for LOC644661 Gene

Expression for LOC644661 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC644661 Gene

mRNA differential expression in normal tissues according to GTEx for LOC644661 Gene

This gene is overexpressed in Pancreas (x30.9), Testis (x10.1), and Liver (x5.4).
genes like me logo Genes that share expression patterns with LOC644661: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC644661 Gene

Orthologs for LOC644661 Gene

No data available for Orthologs and Evolution for LOC644661 Gene

Paralogs for LOC644661 Gene

No data available for Paralogs for LOC644661 Gene

Variants for LOC644661 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC644661 Gene

Disorders for LOC644661 Gene

No disorders were found for LOC644661 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC644661 Gene

Publications for LOC644661 Gene

No publications were found for LOC644661 Gene.

No data available for Mastermind for LOC644661 Gene

Products for LOC644661 Gene

Sources for LOC644661 Gene