Aliases for LOC644169 Gene

Aliases for LOC644169 Gene

  • Voltage Dependent Anion Channel 1 Pseudogene 3

External Ids for LOC644169 Gene

Previous GeneCards Identifiers for LOC644169 Gene

  • GC11M006465
  • GC11M006509

Summaries for LOC644169 Gene

GeneCards Summary for LOC644169 Gene

LOC644169 (Voltage Dependent Anion Channel 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC644169 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC644169 Gene

Genomics for LOC644169 Gene

GeneHancer (GH) Regulatory Elements for LOC644169 Gene

Promoters and enhancers for LOC644169 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J006486 Enhancer 0.7 Ensembl ENCODE 750.6 +0.9 935 3.4 SP1 IKZF1 IKZF2 SOX13 RUNX3 FOXA2 HNF4A EBF1 RXRA ENSG00000254595 LOC644169 lnc-ARFIP2-2 TIMM10B APBB1 SMPD1 MRPL17 ENSG00000241678 ILK TAF10
GH11J006495 Promoter 0.4 EPDnew 0.4 -6.6 -6566 0.1 SUPT5H DNHD1 ENSG00000254595 LOC644169 lnc-ARFIP2-2 ENSG00000283977
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC644169 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC644169 Gene

Genomic Locations for LOC644169 Gene
chr11:6,488,178-6,489,377
(GRCh38/hg38)
Size:
1,200 bases
Orientation:
Minus strand
chr11:6,509,411-6,510,607
(GRCh37/hg19)
Size:
1,197 bases
Orientation:
Minus strand

Genomic View for LOC644169 Gene

Genes around LOC644169 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC644169 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC644169 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC644169 Gene

Proteins for LOC644169 Gene

Post-translational modifications for LOC644169 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC644169 Gene

Domains & Families for LOC644169 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC644169 Gene

Function for LOC644169 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC644169 Gene

Localization for LOC644169 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC644169 Gene

Pathways & Interactions for LOC644169 Gene

PathCards logo

SuperPathways for LOC644169 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC644169 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC644169 Gene

Drugs & Compounds for LOC644169 Gene

No Compound Related Data Available

Transcripts for LOC644169 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC644169 Gene

No ASD Table

Relevant External Links for LOC644169 Gene

GeneLoc Exon Structure for
LOC644169

No data available for mRNA/cDNA for LOC644169 Gene

Expression for LOC644169 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC644169 Gene

genes like me logo Genes that share expression patterns with LOC644169: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC644169 Gene

Orthologs for LOC644169 Gene

No data available for Orthologs and Evolution for LOC644169 Gene

Paralogs for LOC644169 Gene

No data available for Paralogs for LOC644169 Gene

Variants for LOC644169 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC644169 Gene

Disorders for LOC644169 Gene

No disorders were found for LOC644169 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC644169 Gene

Publications for LOC644169 Gene

  1. Utility of syntenic relationships of VDAC1 pseudogenes for not only an understanding of the phylogenetic divergence history of rodents, but also ascertaining possible pseudogene candidates as genuine pseudogenes. (PMID: 24858958) Ido Y … Shinohara Y (Genomics 2014) 3 56

No data available for External Links for LOC644169 Gene

Products for LOC644169 Gene

Sources for LOC644169 Gene