This gene has characteristics of a retrotransposed pseudogene derived from the PGAM1 gene. [provided by RefSeq, Jul 2008] See more...

Aliases for LOC643576 Gene

Aliases for LOC643576 Gene

  • Phosphoglycerate Mutase 1 (Brain) Pseudogene 3

External Ids for LOC643576 Gene

Previous GeneCards Identifiers for LOC643576 Gene

  • GC12P102942
  • GC12P104425

Summaries for LOC643576 Gene

Entrez Gene Summary for LOC643576 Gene

  • This gene has characteristics of a retrotransposed pseudogene derived from the PGAM1 gene. [provided by RefSeq, Jul 2008]

GeneCards Summary for LOC643576 Gene

LOC643576 (Phosphoglycerate Mutase 1 (Brain) Pseudogene) is a Pseudogene.

Additional gene information for LOC643576 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC643576 Gene

Genomics for LOC643576 Gene

GeneHancer (GH) Regulatory Elements for LOC643576 Gene

Promoters and enhancers for LOC643576 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J104030 Promoter 0.3 Ensembl 750.6 +0.1 60 0.4 ENSG00000216285 LOC643576 lnc-C12orf73-1 piR-37184-003 GLT8D2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC643576 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC643576 Gene

Genomic Locations for LOC643576 Gene
chr12:104,030,741-104,032,464
(GRCh38/hg38)
Size:
1,724 bases
Orientation:
Plus strand
chr12:104,424,519-104,426,242
(GRCh37/hg19)
Size:
1,724 bases
Orientation:
Plus strand

Genomic View for LOC643576 Gene

Genes around LOC643576 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC643576 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC643576 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC643576 Gene

Proteins for LOC643576 Gene

Post-translational modifications for LOC643576 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC643576 Gene

Domains & Families for LOC643576 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC643576 Gene

Function for LOC643576 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC643576 Gene

Localization for LOC643576 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC643576 Gene

Pathways & Interactions for LOC643576 Gene

PathCards logo

SuperPathways for LOC643576 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC643576 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC643576 Gene

Drugs & Compounds for LOC643576 Gene

No Compound Related Data Available

Transcripts for LOC643576 Gene

mRNA/cDNA for LOC643576 Gene

(1) REFSEQ mRNAs :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC643576 Gene

No ASD Table

Relevant External Links for LOC643576 Gene

GeneLoc Exon Structure for
LOC643576

Expression for LOC643576 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC643576 Gene

genes like me logo Genes that share expression patterns with LOC643576: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC643576 Gene

Orthologs for LOC643576 Gene

No data available for Orthologs and Evolution for LOC643576 Gene

Paralogs for LOC643576 Gene

No data available for Paralogs for LOC643576 Gene

Variants for LOC643576 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC643576 Gene

Disorders for LOC643576 Gene

No disorders were found for LOC643576 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC643576 Gene

Publications for LOC643576 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 56

No data available for External Links for LOC643576 Gene

Products for LOC643576 Gene

Sources for LOC643576 Gene