Aliases for LOC642502 Gene

Aliases for LOC642502 Gene

  • Succinate Dehydrogenase Complex Subunit C Pseudogene 3
  • Succinate Dehydrogenase Complex, Subunit C, Integral Membrane Protein, 15kDa Pseudogene 3
  • Succinate Dehydrogenase Cytochrome B560 Subunit, Mitochondrial 3
  • Succinate-Ubiquinone Oxidoreductase Cytochrome B Large Subunit 3
  • Integral Membrane Protein CII-3 3
  • CYB560 3
  • QPs-1 3
  • CYBL 3
  • QPs1 3
  • SDH3 3
  • SDHC 3

External Ids for LOC642502 Gene

Previous GeneCards Identifiers for LOC642502 Gene

  • GC17M001707
  • GC01P161284
  • GC17M001763

Summaries for LOC642502 Gene

GeneCards Summary for LOC642502 Gene

LOC642502 (Succinate Dehydrogenase Complex Subunit C Pseudogene) is a Pseudogene.

Additional gene information for LOC642502 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC642502 Gene

Genomics for LOC642502 Gene

GeneHancer (GH) Regulatory Elements for LOC642502 Gene

Promoters and enhancers for LOC642502 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J001865 Enhancer 0.5 ENCODE 0.4 -7.2 -7191 0.1 CTCF RAD21 TRIM22 RUNX3 SMC3 ZFP91 piR-57133-241 RPA1 SMYD4 MIR22HG WDR81 MIR22 DPH1 LOC642502 RF00017-2214
GH17J001866 Enhancer 0.3 Ensembl 0.4 -6.6 -6640 0.2 CTCF piR-57133-241 SMYD4 RPA1 MIR22HG WDR81 MIR22 DPH1 LOC642502 RF00017-2214
GH17J001860 Enhancer 0.2 ENCODE 0.6 -3.0 -2963 1.5 SMYD4 RPA1 MIR22 MIR22HG WDR81 SERPINF2 DPH1 RTN4RL1 LOC642502 piR-57133-241
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC642502 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC642502 gene promoter:
  • CREB
  • deltaCREB

Genomic Locations for LOC642502 Gene

Genomic Locations for LOC642502 Gene
chr17:1,857,280-1,858,461
(GRCh38/hg38)
Size:
1,182 bases
Orientation:
Minus strand
chr17:1,760,574-1,761,755
(GRCh37/hg19)
Size:
1,182 bases
Orientation:
Minus strand

Genomic View for LOC642502 Gene

Genes around LOC642502 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC642502 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC642502 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC642502 Gene

Proteins for LOC642502 Gene

Post-translational modifications for LOC642502 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC642502 Gene

Domains & Families for LOC642502 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC642502 Gene

Function for LOC642502 Gene

Phenotypes From GWAS Catalog for LOC642502 Gene

Phenotypes for LOC642502 Gene

genes like me logo Genes that share phenotypes with LOC642502: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC642502 Gene

Localization for LOC642502 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC642502 Gene

Pathways & Interactions for LOC642502 Gene

PathCards logo

SuperPathways for LOC642502 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC642502 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC642502 Gene

Drugs & Compounds for LOC642502 Gene

No Compound Related Data Available

Transcripts for LOC642502 Gene

mRNA/cDNA for LOC642502 Gene

(1) REFSEQ mRNAs :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC642502 Gene

No ASD Table

Relevant External Links for LOC642502 Gene

GeneLoc Exon Structure for
LOC642502

Expression for LOC642502 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC642502 Gene

genes like me logo Genes that share expression patterns with LOC642502: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC642502 Gene

Orthologs for LOC642502 Gene

No data available for Orthologs and Evolution for LOC642502 Gene

Paralogs for LOC642502 Gene

No data available for Paralogs for LOC642502 Gene

Variants for LOC642502 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC642502 Gene

Disorders for LOC642502 Gene

No disorders were found for LOC642502 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC642502 Gene

Publications for LOC642502 Gene

  1. Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. (PMID: 22589738) Fox CS … Borecki IB (PLoS genetics 2012) 3 56
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 56
  3. A human succinate-ubiquinone oxidoreductase CII-3 subunit gene ending in a polymorphic dinucleotide repeat is located within the sulfonylurea receptor (SUR) gene. (PMID: 9851882) Wohllk N … Cote GJ (Molecular genetics and metabolism 1998) 3 56

No data available for External Links for LOC642502 Gene

Products for LOC642502 Gene

Sources for LOC642502 Gene