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LOC642484 (Uncharacterized LOC642484) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LOC642484 include Hereditary Hemorrhagic Telangiectasia.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH18J056019 | Enhancer | 0.5 | Ensembl | 16 | +170.2 | 170161 | 5 | JUND SPI1 MEIS2 GABPB1 PKNOX1 FOS | LOC642484 ENSG00000287248 piR-60885-051 LOC107985164 TCF4 WDR7 | |
GH18J055988 | Enhancer | 0.7 | Ensembl ENCODE | 7.4 | +202.0 | 201954 | 2.6 | RFX1 ZBTB40 BHLHE40 MEIS2 CEBPB IKZF1 FOXJ2 PKNOX1 MEF2D NR2F2 | LOC642484 LINC01416 HSALNG0121710 LOC107985164 TCF4 WDR7 | |
GH18J055997 | Promoter/Enhancer | 1 | Ensembl ENCODE CraniofacialAtlas | 5.3 | +192.7 | 192687 | 3.2 | GABPA ZNF316 SP1 IKZF1 CTCF EZH2 | LINC01416 LOC642484 piR-60885-051 LOC107985164 TCF4 WDR7 | |
GH18J056082 | Enhancer | 0.6 | Ensembl ENCODE | 6.4 | +107.9 | 107861 | 4 | CTCF RAD21 NR2F2 | LOC642484 HSALNG0121713 ENSG00000267732 LINC01539 LINC01905 TCF4 WDR7 | |
GH18J055900 | Enhancer | 0.8 | VISTA UCNEbase Ensembl | 4.3 | +290.3 | 290314 | 1.3 | EP300 | LOC642484 LOC107985164 HSALNG0121711 LINC01416 TCF4 WDR7 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000051A07F_9606 | lncRNA | 2558 | 4 |
RefSeq: NR_148972, Ensembl: ENST00000382897 (view in UCSC) , LNCipedia: LINC01539:1, NONCODE: NONHSAT059389.2, |
URS000049C49C_9606 | lncRNA | 558 | 4 |
Ensembl: ENST00000589754 (view in UCSC) , LncBook: HSALNT0251583, LNCipedia: LINC01539:18, NONCODE: NONHSAT059393.2, |
URS0000DB7163_9606 | lncRNA | 1805 | 1 |
Ensembl: ENST00000650203 (view in UCSC) , |
URS00008C2389_9606 | lncRNA | 1735 | 3 |
LncBook: HSALNT0251577, LNCipedia: LINC01539:21, NONCODE: NONHSAT059390.2, |
URS00008B4A7B_9606 | lncRNA | 1334 | 3 |
LncBook: HSALNT0251604, LNCipedia: LINC01539:8, NONCODE: NONHSAT059402.2, |
Disorder | Aliases | PubMed IDs |
---|---|---|
hereditary hemorrhagic telangiectasia |
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