Aliases for LOC606724 Gene

Aliases for LOC606724 Gene

  • Coronin 1A Pseudogene 3
  • Coronin, Actin Binding Protein, 1A Pseudogene 3

External Ids for LOC606724 Gene

Previous GeneCards Identifiers for LOC606724 Gene

  • GC16U900504
  • GC16P029368
  • GC16P029460

Summaries for LOC606724 Gene

GeneCards Summary for LOC606724 Gene

LOC606724 (Coronin 1A Pseudogene) is a Pseudogene.

Additional gene information for LOC606724 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC606724 Gene

Genomics for LOC606724 Gene

GeneHancer (GH) Regulatory Elements for LOC606724 Gene


Top Transcription factor binding sites by QIAGEN in the LOC606724 gene promoter:
  • COMP1
  • CUTL1
  • FOXI1
  • HFH-3
  • NF-1
  • NF-1/L
  • Pax-2
  • Sox5
  • SRF
  • SRF (504 AA)

Genomic Locations for LOC606724 Gene

Genomic Locations for LOC606724 Gene
chr16:29,449,345-29,449,915
(GRCh38/hg38)
Size:
571 bases
Orientation:
Plus strand
chr16:29,460,512-29,461,236
(GRCh37/hg19)
Size:
725 bases
Orientation:
Plus strand

Genomic View for LOC606724 Gene

Genes around LOC606724 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC606724 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC606724 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC606724 Gene

Proteins for LOC606724 Gene

Post-translational modifications for LOC606724 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC606724 Gene

Domains & Families for LOC606724 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC606724 Gene

Function for LOC606724 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC606724 Gene

Localization for LOC606724 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC606724 Gene

Pathways & Interactions for LOC606724 Gene

PathCards logo

SuperPathways for LOC606724 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC606724 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC606724 Gene

Drugs & Compounds for LOC606724 Gene

No Compound Related Data Available

Transcripts for LOC606724 Gene

mRNA/cDNA for LOC606724 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC606724 Gene

No ASD Table

Relevant External Links for LOC606724 Gene

GeneLoc Exon Structure for
LOC606724

Expression for LOC606724 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC606724 Gene

mRNA differential expression in normal tissues according to GTEx for LOC606724 Gene

This gene is overexpressed in Whole Blood (x32.1).

SOURCE GeneReport for Unigene cluster for LOC606724 Gene:

Hs.744975
genes like me logo Genes that share expression patterns with LOC606724: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC606724 Gene

Orthologs for LOC606724 Gene

No data available for Orthologs and Evolution for LOC606724 Gene

Paralogs for LOC606724 Gene

No data available for Paralogs for LOC606724 Gene

Variants for LOC606724 Gene

Sequence variations from dbSNP and Humsavar for LOC606724 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1008405178 -- 29,449,167(+) A/C/G upstream_transcript_variant
rs1009879525 -- 29,449,556(+) G/A non_coding_transcript_variant
rs1019994037 -- 29,450,398(+) T/C downstream_transcript_variant
rs1032580697 -- 29,449,267(+) A/G upstream_transcript_variant
rs1038289308 -- 29,449,075(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC606724 Gene

Variant ID Type Subtype PubMed ID
esv22245 CNV gain 19812545
esv2714183 CNV deletion 23290073
esv2758641 CNV gain 17122850
esv2758642 CNV gain 17122850
esv29892 CNV gain 19812545
esv3364056 CNV duplication 20981092
esv3444809 CNV duplication 20981092
nsv1056249 CNV gain 25217958
nsv1078392 CNV duplication 25765185
nsv1146152 CNV duplication 26484159
nsv498862 CNV loss 21111241
nsv571809 CNV loss 21841781
nsv571819 CNV gain 21841781
nsv820959 CNV duplication 20802225
nsv821543 CNV duplication 20802225
nsv9426 CNV gain 18304495
nsv9431 CNV gain+loss 18304495
nsv960011 CNV duplication 23825009
nsv978130 CNV duplication 23825009
nsv984307 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC606724 Gene

Disorders for LOC606724 Gene

No disorders were found for LOC606724 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC606724 Gene

Publications for LOC606724 Gene

No publications were found for LOC606724 Gene.

No data available for External Links for LOC606724 Gene

Products for LOC606724 Gene

Sources for LOC606724 Gene