Aliases for LOC442497 Gene

Subcategory (RNA class) for LOC442497 Gene


Number of RNA Genes sources:

3 / 14

Aliases for LOC442497 Gene

  • Uncharacterized LOC442497 3
  • NONHSAG046730 92
  • HSALNG0055523 167
  • Lnc-FAM20C-6 168

External Ids for LOC442497 Gene

Previous GeneCards Identifiers for LOC442497 Gene

  • GC07Ph00514
  • GC07U901584
  • GC07P000420

Summaries for LOC442497 Gene

GeneCards Summary for LOC442497 Gene

LOC442497 (Uncharacterized LOC442497) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC442497 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC442497 Gene

Genomics for LOC442497 Gene

GeneHancer (GH) Regulatory Elements for LOC442497 Gene

Promoters and enhancers for LOC442497 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J000378 Promoter/Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 500.7 +0.6 558 1.8 ZIC2 PCBP1 SRF GABPB1 SMAD4 ELF1 RBM39 CTBP2 HNRNPL SUZ12 ENSG00000249574 LOC442497 HRAT92 PDGFA hsa-miR-5096-065
GH07J000381 Enhancer 0.3 ENCODE 0.7 +2.6 2612 0.9 ZNF366 HRAT92 PDGFA ENSG00000249574 LOC442497 hsa-miR-5096-065
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC442497 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC442497 Gene

Genomic Locations for LOC442497 Gene
3,520 bases
Plus strand

Genomic View for LOC442497 Gene

Genes around LOC442497 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC442497 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC442497 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC442497 Gene

Proteins for LOC442497 Gene

Post-translational modifications for LOC442497 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC442497 Gene

Domains & Families for LOC442497 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC442497 Gene

Function for LOC442497 Gene

Phenotypes for LOC442497 Gene

genes like me logo Genes that share phenotypes with LOC442497: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC442497 Gene

Localization for LOC442497 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC442497 Gene

Pathways & Interactions for LOC442497 Gene

PathCards logo

SuperPathways for LOC442497 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC442497 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC442497 Gene

Drugs & Compounds for LOC442497 Gene

No Compound Related Data Available

Transcripts for LOC442497 Gene

mRNA/cDNA for LOC442497 Gene

2 RNACentral transcripts :
1 NCBI additional mRNA sequence :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC442497 Gene

No ASD Table

Relevant External Links for LOC442497 Gene

GeneLoc Exon Structure for

Expression for LOC442497 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC442497 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC442497

SOURCE GeneReport for Unigene cluster for LOC442497 Gene:

genes like me logo Genes that share expression patterns with LOC442497: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC442497 Gene

Orthologs for LOC442497 Gene

No data available for Orthologs and Evolution for LOC442497 Gene

Paralogs for LOC442497 Gene

No data available for Paralogs for LOC442497 Gene

Variants for LOC442497 Gene

Additional dbSNP identifiers (rs#s) for LOC442497 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC442497 Gene

Variant ID Type Subtype PubMed ID
esv3611754 CNV gain 21293372
esv3611764 CNV gain 21293372
esv3611772 CNV gain 21293372
esv3611778 CNV gain 21293372
nsv1074460 CNV deletion 25765185
nsv950780 CNV deletion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC442497 Gene

Disorders for LOC442497 Gene

No disorders were found for LOC442497 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC442497 Gene

Publications for LOC442497 Gene

  1. Defining the Protein-Protein Interaction Network of the Human Protein Tyrosine Phosphatase Family. (PMID: 27432908) Li X … Wang W (Molecular & cellular proteomics : MCP 2016) 3 54
  2. PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry. (PMID: 24332808) Maréchal A … Zou L (Molecular cell 2014) 3 54
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC442497 Gene

Products for LOC442497 Gene

Sources for LOC442497 Gene