LOC442172 Gene (Pseudogene)

Cell Division Cycle Associated 7 Pseudogene

GC06P027268
GIFtS:
2
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Aliases for LOC442172 Gene

Aliases for LOC442172 Gene

  • Cell Division Cycle Associated 7 Pseudogene 3

External Ids for LOC442172 Gene

Previous GeneCards Identifiers for LOC442172 Gene

  • GC06P027345
  • GC06P027229

Summaries for LOC442172 Gene

GeneCards Summary for LOC442172 Gene

LOC442172 (Cell Division Cycle Associated 7 Pseudogene) is a Pseudogene.

Additional gene information for LOC442172 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC442172 Gene

Genomics for LOC442172 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC442172 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J027268 Promoter 0.6 Ensembl 600.7 +0.2 189 0.4 CREB1 EZH2 ZBTB33 ENSG00000270935 LOC442172 POM121L2 RNU6-471P PRSS16 ZNF603P TRI-AAT9-1 LOC105375107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC442172 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC442172 Gene

Genomic Locations for LOC442172 Gene
chr6:27,268,012-27,269,362
(GRCh38/hg38)
Size:
1,351 bases
Orientation:
Plus strand
chr6:27,235,885-27,237,008
(GRCh37/hg19)
Size:
1,124 bases
Orientation:
Plus strand

Genomic View for LOC442172 Gene

Genes around LOC442172 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC442172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC442172 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC442172 Gene

Proteins for LOC442172 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC442172 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC442172 Gene

Domains & Families for LOC442172 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC442172 Gene

Function for LOC442172 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC442172 Gene

Localization for LOC442172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC442172 Gene

Pathways & Interactions for LOC442172 Gene

PathCards logo

SuperPathways for LOC442172 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC442172 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC442172 Gene

Drugs & Compounds for LOC442172 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC442172 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC442172 Gene

No ASD Table

Relevant External Links for LOC442172 Gene

GeneLoc Exon Structure for
LOC442172

No data available for mRNA/cDNA for LOC442172 Gene

Expression for LOC442172 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC442172 Gene

mRNA expression in normal human tissues for LOC442172 Gene
mRNA expression by GTEx for LOC442172 Gene

mRNA differential expression in normal tissues according to GTEx for LOC442172 Gene

This gene is overexpressed in Testis (x48.5).
genes like me logo Genes that share expression patterns with LOC442172: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC442172 Gene

Orthologs for LOC442172 Gene

No data available for Orthologs and Evolution for LOC442172 Gene

Paralogs for LOC442172 Gene

No data available for Paralogs for LOC442172 Gene

Variants for LOC442172 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC442172 Gene

Disorders for LOC442172 Gene

No disorders were found for LOC442172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC442172 Gene

Publications for LOC442172 Gene

No publications were found for LOC442172 Gene.

No data available for Mastermind for LOC442172 Gene

Products for LOC442172 Gene

Sources for LOC442172 Gene