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Aliases for LOC441728 Gene

Aliases for LOC441728 Gene

  • Golgin-Like Pseudogene 3
  • AC019294.1 5

External Ids for LOC441728 Gene

Previous GeneCards Identifiers for LOC441728 Gene

  • GC15P073829
  • GC15P073854
  • GC15P076067
  • GC15P052824

Summaries for LOC441728 Gene

GeneCards Summary for LOC441728 Gene

LOC441728 (Golgin-Like Pseudogene) is a Pseudogene.

Additional gene information for LOC441728 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC441728 Gene

Genomics for LOC441728 Gene

GeneHancer (GH) Regulatory Elements for LOC441728 Gene

Promoters and enhancers for LOC441728 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I075775 Enhancer 0.9 ENCODE 550.8 +1.0 988 0.7 ATF1 INSM2 KLF17 RARA ETS1 ZEB1 GLIS2 ZNF366 ZNF391 FOS LOC441728 ENSG00000261043 CSPG4 ENSG00000203392 SNX33 IMP3 DNM1P35 GC15P075786
GH15I075776 Enhancer 0.6 ENCODE 550.8 +0.1 145 0.2 SCRT1 PKNOX1 LEF1 SP3 RFX1 NFYC SP2 CTBP1 POLR2A SCRT2 LOC441728 CSPG4 ENSG00000203392 IMP3 SNX33 ENSG00000261043 GC15P075786
GH15I075366 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 45.8 -406.6 -406575 3.8 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ENSG00000260274 MAN2C1 DNM1P35 SIN3A LOC441728 FBXO22 EDC3 COMMD4 LOC101929333 CLK3
GH15I074775 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 30.4 -987.2 -987157 26 DMAP1 IRF4 YY1 SLC30A9 ZNF143 ZNF263 SP3 MEF2D GLIS1 RCOR2 CSK MIR4513 EDC3 SIN3A LOC441728 ULK3 ENSG00000260274 C15orf39 DNM1P35 ENSG00000203392
GH15I075346 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 23 -426.2 -426217 5 HDGF ARID4B SIN3A ZNF2 ZNF213 ZNF143 KLF13 ZNF263 SP3 SP5 NEIL1 ENSG00000275645 ENSG00000260274 DNM1P35 EDC3 SIN3A MAN2C1 SNUPN FBXO22 LOC441728
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC441728 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC441728 gene promoter:

Genomic Locations for LOC441728 Gene

Genomic Locations for LOC441728 Gene
chr15:75,775,330-75,789,719
(GRCh38/hg38)
Size:
14,390 bases
Orientation:
Plus strand
chr15:76,067,894-76,079,321
(GRCh37/hg19)

Genomic View for LOC441728 Gene

Genes around LOC441728 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC441728 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC441728 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC441728 Gene

Proteins for LOC441728 Gene

Post-translational modifications for LOC441728 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC441728 Gene

Domains & Families for LOC441728 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC441728 Gene

Function for LOC441728 Gene

Phenotypes From GWAS Catalog for LOC441728 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC441728 Gene

Localization for LOC441728 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC441728 Gene

Pathways & Interactions for LOC441728 Gene

SuperPathways for LOC441728 Gene

No Data Available

Interacting Proteins for LOC441728 Gene

Gene Ontology (GO) - Biological Process for LOC441728 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC441728 Gene

Drugs & Compounds for LOC441728 Gene

No Compound Related Data Available

Transcripts for LOC441728 Gene

mRNA/cDNA for LOC441728 Gene

(4) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC441728 Gene

Golgin-like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC441728 Gene

No ASD Table

Relevant External Links for LOC441728 Gene

GeneLoc Exon Structure for
LOC441728

Expression for LOC441728 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC441728 Gene

mRNA differential expression in normal tissues according to GTEx for LOC441728 Gene

This gene is overexpressed in Testis (x52.3).

SOURCE GeneReport for Unigene cluster for LOC441728 Gene:

Hs.635230
genes like me logo Genes that share expression patterns with LOC441728: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC441728 Gene

Orthologs for LOC441728 Gene

Evolution for LOC441728 Gene

ENSEMBL:
Gene Tree for LOC441728 (if available)
TreeFam:
Gene Tree for LOC441728 (if available)

No data available for Orthologs for LOC441728 Gene

Paralogs for LOC441728 Gene

No data available for Paralogs for LOC441728 Gene

Variants for LOC441728 Gene

Sequence variations from dbSNP and Humsavar for LOC441728 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000252778 -- 75,779,219(+) C/G/T intron_variant
rs1000442988 -- 75,787,871(+) G/A non_coding_transcript_variant
rs1000708115 -- 75,779,527(+) T/G intron_variant
rs1001139644 -- 75,782,877(+) A/G non_coding_transcript_variant
rs1001293164 -- 75,778,354(+) T/ intron_variant

Variation tolerance for LOC441728 Gene

Gene Damage Index Score: 1.23; 24.69% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for LOC441728 Gene

Disorders for LOC441728 Gene

Additional Disease Information for LOC441728

No disorders were found for LOC441728 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC441728 Gene

Publications for LOC441728 Gene

No publications were found for LOC441728 Gene.

Products for LOC441728 Gene

Sources for LOC441728 Gene

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