Aliases for LOC441239 Gene

Aliases for LOC441239 Gene

  • Uncharacterized LOC441239 3 5
  • Uncharacterized Protein LOC441239 3
  • LOC441239 Protein 13
  • NONHSAG047796 92
  • Lnc-ZNF117-1 168
  • AC073349.1 5

External Ids for LOC441239 Gene

Previous GeneCards Identifiers for LOC441239 Gene

  • GC07M063776
  • GC07M063985
  • GC07M064349

Summaries for LOC441239 Gene

GeneCards Summary for LOC441239 Gene

LOC441239 (Uncharacterized LOC441239) is a Protein Coding gene.

Additional gene information for LOC441239 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC441239 Gene

Genomics for LOC441239 Gene

GeneHancer (GH) Regulatory Elements for LOC441239 Gene

Promoters and enhancers for LOC441239 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J064887 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 500.7 +1.1 1099 2 CTCF ZBTB25 TGIF2 EZH2 RAD21 SAP130 SPI1 GABPB1 MAZ SIN3A LOC441239 EEF1DP4 ZNF273 ZNF117 ENSG00000234338 lnc-ZNF117-3 lnc-ZNF273-1
GH07J064893 Enhancer 0.8 dbSUPER 500.7 -1.6 -1598 0.2 PHB2 HES1 TOE1 RUNX1 CTBP1 HDAC3 NCOR1 TRIM25 ZNF282 ZNF316 LOC441239 EEF1DP4 ZNF273 piR-54987-124 lnc-ZNF273-1
GH07J064894 Enhancer 0.8 dbSUPER 500.7 -1.9 -1919 0.2 PHB2 HES1 TOE1 RUNX1 CTBP1 HDAC3 NCOR1 TRIM25 ZNF282 NFIC LOC441239 EEF1DP4 ZNF680 ZNF273 piR-54987-124 lnc-ZNF273-1
GH07J064892 Enhancer 0.7 dbSUPER 500.7 -1.3 -1288 0.3 TOE1 CTBP1 MBD2 ZNF316 ZNF592 RBBP5 NFE2 TAL1 EP400 MAFG LOC441239 EEF1DP4 ZNF117 ZNF273 piR-54987-124 lnc-ZNF273-1
GH07J064890 Enhancer 0.3 dbSUPER 500.7 -0.2 -243 0.2 EZH2 LOC441239 ZNF273 lnc-ZNF273-1 piR-54987-124
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC441239 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC441239 gene promoter:
  • E47
  • GATA-1
  • GR
  • GR-alpha
  • Hand1

Genomic Locations for LOC441239 Gene

Genomic Locations for LOC441239 Gene
chr7:64,887,751-64,890,100
(GRCh38/hg38)
Size:
2,350 bases
Orientation:
Minus strand
chr7:64,348,715-64,350,478
(GRCh37/hg19)
Size:
1,764 bases
Orientation:
Minus strand

Genomic View for LOC441239 Gene

Genes around LOC441239 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC441239 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC441239 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC441239 Gene

Proteins for LOC441239 Gene

  • Protein details for LOC441239 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q6P462-Q6P462_HUMAN
    Recommended name:
    LOC441239 protein
    Protein Accession:
    Q6P462

    Protein attributes for LOC441239 Gene

    Size:
    233 amino acids
    Molecular mass:
    24728 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LOC441239 Gene

Post-translational modifications for LOC441239 Gene

No Post-translational modifications

Other Protein References for LOC441239 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC441239 Gene

Domains & Families for LOC441239 Gene

Protein Domains for LOC441239 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for LOC441239 Gene

GenScript: Design optimal peptide antigens:
  • LOC441239 protein (Q6P462_HUMAN)
genes like me logo Genes that share domains with LOC441239: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC441239 Gene

Function for LOC441239 Gene

Phenotypes for LOC441239 Gene

genes like me logo Genes that share phenotypes with LOC441239: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC441239 Gene

Localization for LOC441239 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC441239 Gene

Pathways & Interactions for LOC441239 Gene

PathCards logo

SuperPathways for LOC441239 Gene

No Data Available

Interacting Proteins for LOC441239 Gene

;

Gene Ontology (GO) - Biological Process for LOC441239 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC441239 Gene

Drugs & Compounds for LOC441239 Gene

No Compound Related Data Available

Transcripts for LOC441239 Gene

mRNA/cDNA for LOC441239 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 RNACentral transcripts :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC441239 Gene

No ASD Table

Relevant External Links for LOC441239 Gene

GeneLoc Exon Structure for
LOC441239

Expression for LOC441239 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC441239 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC441239

SOURCE GeneReport for Unigene cluster for LOC441239 Gene:

Hs.632019
genes like me logo Genes that share expression patterns with LOC441239: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC441239 Gene

Orthologs for LOC441239 Gene

Evolution for LOC441239 Gene

ENSEMBL:
Gene Tree for LOC441239 (if available)
TreeFam:
Gene Tree for LOC441239 (if available)

No data available for Orthologs for LOC441239 Gene

Paralogs for LOC441239 Gene

No data available for Paralogs for LOC441239 Gene

Variants for LOC441239 Gene

Additional dbSNP identifiers (rs#s) for LOC441239 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC441239 Gene

Disorders for LOC441239 Gene

No disorders were found for LOC441239 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC441239 Gene

Publications for LOC441239 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 13 54
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LOC441239 Gene

Products for LOC441239 Gene

Sources for LOC441239 Gene