Aliases for LOC441087 Gene

Subcategory (RNA class) for LOC441087 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC441087 Gene

  • Uncharacterized LOC441087 3
  • HSALNG0042758 167
  • Lnc-ANKDD1B-5 168

External Ids for LOC441087 Gene

Previous GeneCards Identifiers for LOC441087 Gene

  • GC05P075049
  • GC05U901026

Summaries for LOC441087 Gene

GeneCards Summary for LOC441087 Gene

LOC441087 (Uncharacterized LOC441087) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC441087 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC441087 Gene

Genomics for LOC441087 Gene

GeneHancer (GH) Regulatory Elements for LOC441087 Gene

Promoters and enhancers for LOC441087 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J075715 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 500.7 -0.2 -232 2.8 ZBTB40 ZNF217 EP300 TCF12 SIN3A NRF1 POLR2G SP1 PHF8 ZIC2 POC5 LOC441087 lnc-ANKDD1B-5-001 lnc-COL4A3BP-3 F2R ANKDD1B RF00026-873 RNU6-680P
GH05J075720 Enhancer 0.9 Ensembl 0.7 +3.9 3869 1.4 TCF7 ZBTB25 TGIF2 MYC TEAD1 FOXA2 ZSCAN9 CEBPB TRIM24 TFDP1 lnc-ANKDD1B-5-002 POC5 ANKDD1B LOC441087 lnc-ANKDD1B-5-001
GH05J075712 Promoter 0.6 EPDnew 0.7 -5.0 -4987 0.1 CEBPG CEBPB ATF3 POC5 LOC441087 RF00026-873 RNU6-680P lnc-COL4A3BP-3
GH05J075709 Enhancer 0.5 Ensembl 0.4 -6.7 -6731 1.8 ZNF316 SPI1 MAFG MAFK MAFF EMSY RF00026-873 RNU6-680P POC5 LOC441087 lnc-COL4A3BP-3
GH05J075729 Enhancer 0.3 Ensembl ENCODE 0.4 +11.9 11931 0.3 lnc-ANKDD1B-5-002 LOC441087 lnc-POC5-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC441087 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC441087 Gene

Genomic Locations for LOC441087 Gene
chr5:75,717,432-75,733,324
(GRCh38/hg38)
Size:
15,893 bases
Orientation:
Plus strand

Genomic View for LOC441087 Gene

Genes around LOC441087 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC441087 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC441087 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC441087 Gene

Proteins for LOC441087 Gene

Post-translational modifications for LOC441087 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC441087 Gene

Domains & Families for LOC441087 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC441087 Gene

Function for LOC441087 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC441087 Gene

Localization for LOC441087 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC441087 Gene

Pathways & Interactions for LOC441087 Gene

PathCards logo

SuperPathways for LOC441087 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC441087 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC441087 Gene

Drugs & Compounds for LOC441087 Gene

No Compound Related Data Available

Transcripts for LOC441087 Gene

mRNA/cDNA for LOC441087 Gene

4 RNACentral transcripts :
2 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC441087 Gene

No ASD Table

Relevant External Links for LOC441087 Gene

GeneLoc Exon Structure for
LOC441087

Expression for LOC441087 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC441087 Gene

Orthologs for LOC441087 Gene

No data available for Orthologs and Evolution for LOC441087 Gene

Paralogs for LOC441087 Gene

No data available for Paralogs for LOC441087 Gene

Variants for LOC441087 Gene

Additional dbSNP identifiers (rs#s) for LOC441087 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC441087 Gene

Disorders for LOC441087 Gene

No disorders were found for LOC441087 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC441087 Gene

Publications for LOC441087 Gene

No publications were found for LOC441087 Gene.

No data available for Mastermind for LOC441087 Gene

Products for LOC441087 Gene

Sources for LOC441087 Gene