Aliases for LOC441086 Gene

Subcategory (RNA class) for LOC441086 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC441086 Gene

  • Uncharacterized LOC441086 3

External Ids for LOC441086 Gene

Previous GeneCards Identifiers for LOC441086 Gene

  • GC05P074183
  • GC05U900657
  • GC05P074148

Summaries for LOC441086 Gene

GeneCards Summary for LOC441086 Gene

LOC441086 (Uncharacterized LOC441086) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC441086 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC441086 Gene

Genomics for LOC441086 Gene

GeneHancer (GH) Regulatory Elements for LOC441086 Gene

Promoters and enhancers for LOC441086 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J074863 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 500.7 +1.3 1341 6.9 FOXK2 ZNF217 POLR2G NCOR1 PHF8 TEAD4 ZFX ZIC2 POLR2A CLOCK FAM169A ENSG00000271714 LOC441086 NSA2 ENSG00000242198 GFM2 RF00017-4723
GH05J074849 Promoter/Enhancer 1.1 Ensembl ENCODE 0.4 -14.8 -14802 3.6 POLR2G TCF7 TEAD1 ZNF316 CEBPB MAFF FOS SAP130 MAFK RBM22 NSA2 RNU6-1330P FAM169A LOC441086 ENSG00000271714 RF00998-107
GH05J074848 Promoter 0.8 EPDnew 0.4 -17.1 -17050 0.1 TEAD1 OSR2 SAP130 BCL6 HOMEZ PRDM6 RARA KDM1A THRB HMG20A FAM169A RNU6-1330P ENSG00000271714 LOC441086 RF00998-107
GH05J074832 Enhancer 1 Ensembl ENCODE 0.3 -32.2 -32152 2.1 NCOR1 KDM6A TCF7 TBX3 ZKSCAN8 FOXA2 SIN3A NR2F2 USF1 SAP130 NSA2 RNU6-1330P RNU6-658P RF00998-107 LOC441086 ENSG00000271714 FAM169A
GH05J074842 Enhancer 0.3 Ensembl 0.4 -22.4 -22392 1.4 NR2F6 SOX13 NSA2 FAM169A RNU6-1330P RNU6-658P ENSG00000271714 LOC441086 RF00998-107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC441086 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC441086 gene promoter:
  • Evi-1
  • GATA-1
  • GCNF
  • GCNF-1
  • GCNF-2
  • HNF-1
  • HNF-1A
  • POU2F1
  • POU2F1a

Genomic Locations for LOC441086 Gene

Genomic Locations for LOC441086 Gene
chr5:74,865,893-74,867,275
(GRCh38/hg38)
Size:
1,383 bases
Orientation:
Plus strand

Genomic View for LOC441086 Gene

Genes around LOC441086 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC441086 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC441086 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC441086 Gene

Proteins for LOC441086 Gene

Post-translational modifications for LOC441086 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC441086 Gene

Domains & Families for LOC441086 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC441086 Gene

Function for LOC441086 Gene

Phenotypes for LOC441086 Gene

GenomeRNAi human phenotypes for LOC441086:
genes like me logo Genes that share phenotypes with LOC441086: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC441086 Gene

Localization for LOC441086 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC441086 Gene

Pathways & Interactions for LOC441086 Gene

PathCards logo

SuperPathways for LOC441086 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC441086 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC441086 Gene

Drugs & Compounds for LOC441086 Gene

No Compound Related Data Available

Transcripts for LOC441086 Gene

mRNA/cDNA for LOC441086 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC441086 Gene

No ASD Table

Relevant External Links for LOC441086 Gene

GeneLoc Exon Structure for
LOC441086

Expression for LOC441086 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC441086 Gene

mRNA expression in normal human tissues for LOC441086 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC441086

SOURCE GeneReport for Unigene cluster for LOC441086 Gene:

Hs.653007
genes like me logo Genes that share expression patterns with LOC441086: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC441086 Gene

Orthologs for LOC441086 Gene

No data available for Orthologs and Evolution for LOC441086 Gene

Paralogs for LOC441086 Gene

No data available for Paralogs for LOC441086 Gene

Variants for LOC441086 Gene

Additional dbSNP identifiers (rs#s) for LOC441086 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC441086 Gene

Disorders for LOC441086 Gene

No disorders were found for LOC441086 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC441086 Gene

Publications for LOC441086 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LOC441086 Gene

Products for LOC441086 Gene

Sources for LOC441086 Gene