Aliases for LOC440700 Gene

Aliases for LOC440700 Gene

  • Carbonic Anhydrase 14 Pseudogene 3
  • Carbonic Anhydrase XIV (CA14) Pseudogene 5
  • Carbonic Anhydrase XIV Pseudogene 3
  • AL451074.2 5

External Ids for LOC440700 Gene

Previous GeneCards Identifiers for LOC440700 Gene

  • GC01P162399
  • GC01P163934
  • GC01P163944
  • GC01P165678
  • GC01P165668

Summaries for LOC440700 Gene

GeneCards Summary for LOC440700 Gene

LOC440700 (Carbonic Anhydrase 14 Pseudogene) is a Pseudogene.

Additional gene information for LOC440700 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC440700 Gene

Genomics for LOC440700 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC440700 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J165695 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -1.2 -1167 4 ARHGAP35 CTCF PRDM10 ZNF629 REST IKZF1 NFKBIZ POLR2A RCOR2 LARP7 ALDH9A1 LOC440700 lnc-MGST3-2 ENSG00000215835 MGST3 UCK2 lnc-MGST3-4
GH01J165685 Enhancer 0.8 Ensembl ENCODE 0.4 -12.6 -12566 2.8 CTCF ZNF143 ARID3A RUNX3 EHMT2 ELF1 NR2F1 JUNB BATF HOMEZ ALDH9A1 MGST3 lnc-MGST3-4 LOC440700 lnc-MGST3-2
GH01J165679 Enhancer 0.4 Ensembl 0.4 -19.8 -19849 0.2 ATF7 RUNX3 ATF2 MGST3 ALDH9A1 lnc-MGST3-4 lnc-MGST3-2 LOC440700
GH01J165678 Enhancer 0.3 Ensembl 0.4 -20.3 -20349 0.4 ATF7 RUNX3 MGST3 ALDH9A1 lnc-MGST3-4 LOC440700 lnc-MGST3-2
GH01J165705 Enhancer 0.2 FANTOM5 0.4 +6.9 6942 0.3 ENSG00000273365 MGST3 ALDH9A1 LOC440700 lnc-MGST3-2 UCK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC440700 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC440700 Gene

Genomic Locations for LOC440700 Gene
chr1:165,698,750-165,709,968
(GRCh38/hg38)
Size:
11,219 bases
Orientation:
Plus strand
chr1:165,667,987-165,679,205
(GRCh37/hg19)
Size:
11,219 bases
Orientation:
Plus strand

Genomic View for LOC440700 Gene

Genes around LOC440700 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC440700 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC440700 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC440700 Gene

Proteins for LOC440700 Gene

Post-translational modifications for LOC440700 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC440700 Gene

Domains & Families for LOC440700 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC440700 Gene

Function for LOC440700 Gene

Phenotypes From GWAS Catalog for LOC440700 Gene

genes like me logo Genes that share phenotypes with LOC440700: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC440700 Gene

Localization for LOC440700 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC440700 Gene

Pathways & Interactions for LOC440700 Gene

PathCards logo

SuperPathways for LOC440700 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC440700 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC440700 Gene

Drugs & Compounds for LOC440700 Gene

No Compound Related Data Available

Transcripts for LOC440700 Gene

mRNA/cDNA for LOC440700 Gene

1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC440700 Gene

No ASD Table

Relevant External Links for LOC440700 Gene

GeneLoc Exon Structure for
LOC440700

Expression for LOC440700 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC440700 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC440700

SOURCE GeneReport for Unigene cluster for LOC440700 Gene:

Hs.568703
genes like me logo Genes that share expression patterns with LOC440700: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC440700 Gene

Orthologs for LOC440700 Gene

Evolution for LOC440700 Gene

ENSEMBL:
Gene Tree for LOC440700 (if available)
TreeFam:
Gene Tree for LOC440700 (if available)

No data available for Orthologs for LOC440700 Gene

Paralogs for LOC440700 Gene

No data available for Paralogs for LOC440700 Gene

Variants for LOC440700 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC440700 Gene

Variant ID Type Subtype PubMed ID
esv2719095 CNV deletion 23290073
esv3542045 CNV deletion 23714750
nsv1129137 CNV insertion 24896259

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Variation tolerance and Additional Variant Information for LOC440700 Gene

Disorders for LOC440700 Gene

No disorders were found for LOC440700 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC440700 Gene

Publications for LOC440700 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC440700 Gene

Products for LOC440700 Gene

Sources for LOC440700 Gene