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Aliases for LOC440568 Gene

Aliases for LOC440568 Gene

  • Family With Sequence Similarity 131 Member C Pseudogene 3

External Ids for LOC440568 Gene

Previous GeneCards Identifiers for LOC440568 Gene

  • GC01M016107
  • GC01M016233
  • GC01M016362

Summaries for LOC440568 Gene

GeneCards Summary for LOC440568 Gene

LOC440568 (Family With Sequence Similarity 131 Member C Pseudogene) is a Pseudogene.

Additional gene information for LOC440568 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC440568 Gene

Genomics for LOC440568 Gene

GeneHancer (GH) Regulatory Elements for LOC440568 Gene

Promoters and enhancers for LOC440568 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016039 Enhancer 0.4 FANTOM5 600.7 -0.1 -125 0.4 POLR2A ENSG00000232456 LOC440568 FAM131C CLCNKB FBLIM1 CLCNKA
GH01J016037 Enhancer 0.6 FANTOM5 0.7 +2.1 2109 0.1 IKZF1 ZNF544 ZSCAN4 ZNF311 MCM3 ZNF662 ZSCAN18 ZNF621 ZNF366 HIC1 SPEN MFAP2 CROCC SZRD1 FBLIM1 RPL22P3 ENSG00000178715 ENSG00000237938 ENSG00000224621 TMEM51-AS1
GH01J016042 Enhancer 0.5 Ensembl 0.7 -2.8 -2770 0.4 SCRT2 BCOR ZNF768 KDM1A CLCNKB NBPF1 LOC440568
GH01J016035 Enhancer 0.4 Ensembl 0.7 +3.8 3830 2.4 NFIB NFIC EGR2 CLCNKA HSPB7 CLCNKB NBPF1 ENSG00000232456 LOC440568
GH01J016045 Enhancer 0.2 Ensembl 0.7 -3.3 -3270 0.2 CLCNKB LOC440568
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC440568 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC440568 Gene

Genomic Locations for LOC440568 Gene
chr1:16,034,510-16,040,031
(GRCh38/hg38)
Size:
5,522 bases
Orientation:
Minus strand
chr1:16,361,005-16,366,526
(GRCh37/hg19)
Size:
5,522 bases
Orientation:
Minus strand

Genomic View for LOC440568 Gene

Genes around LOC440568 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC440568 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC440568 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC440568 Gene

Proteins for LOC440568 Gene

Post-translational modifications for LOC440568 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC440568 Gene

Domains & Families for LOC440568 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC440568 Gene

Function for LOC440568 Gene

Phenotypes From GWAS Catalog for LOC440568 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC440568 Gene

Localization for LOC440568 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC440568 Gene

Pathways & Interactions for LOC440568 Gene

PathCards logo

SuperPathways for LOC440568 Gene

No Data Available

Interacting Proteins for LOC440568 Gene

Gene Ontology (GO) - Biological Process for LOC440568 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC440568 Gene

Drugs & Compounds for LOC440568 Gene

No Compound Related Data Available

Transcripts for LOC440568 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC440568 Gene

No ASD Table

Relevant External Links for LOC440568 Gene

GeneLoc Exon Structure for
LOC440568

Expression for LOC440568 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC440568 Gene

mRNA differential expression in normal tissues according to GTEx for LOC440568 Gene

This gene is overexpressed in Brain - Cerebellum (x12.9), Brain - Cerebellar Hemisphere (x12.2), and Brain - Spinal cord (cervical c-1) (x5.1).
genes like me logo Genes that share expression patterns with LOC440568: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC440568 Gene

Orthologs for LOC440568 Gene

No data available for Orthologs and Evolution for LOC440568 Gene

Paralogs for LOC440568 Gene

No data available for Paralogs for LOC440568 Gene

Variants for LOC440568 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC440568 Gene

Disorders for LOC440568 Gene

No disorders were found for LOC440568 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC440568 Gene

Publications for LOC440568 Gene

No publications were found for LOC440568 Gene.

No data available for External Links for LOC440568 Gene

Products for LOC440568 Gene

Sources for LOC440568 Gene

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