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Aliases for LOC440514 Gene

Aliases for LOC440514 Gene

  • Citrate Synthase, Mitochondrial-Like 3

External Ids for LOC440514 Gene

Previous GeneCards Identifiers for LOC440514 Gene

  • GC19P018001
  • GC19P018141
  • GC19P018235
  • GC19P018096
  • GC19P018188
  • GC19P020490
  • GC19P018314
  • GC19P018335
  • GC19P018709
  • GC19P019018
  • GC19P019336
  • GC19P019671
  • GC19P020035
  • GC19P020347

Summaries for LOC440514 Gene

GeneCards Summary for LOC440514 Gene

LOC440514 (Citrate Synthase, Mitochondrial-Like) is a Pseudogene.

Additional gene information for LOC440514 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC440514 Gene

Genomics for LOC440514 Gene

GeneHancer (GH) Regulatory Elements for LOC440514 Gene

Promoters and enhancers for LOC440514 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J018029 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 600.7 -0.5 -478 1.9 ZKSCAN8 ZNF384 NFIB ZSCAN21 NCOA3 SP7 SP1 ZNF644 KAT8 FOSL2 LOC440514 ARRDC2 ENSG00000273654
GH19J018031 Enhancer 0.4 ENCODE dbSUPER 600.7 +1.1 1074 0.2 LOC440514 LOC646666 ENSG00000273654
GH19J018019 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.9 -7914 5.6 ZFX SP1 ELF3 ZKSCAN8 MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 ENSG00000273654 ARRDC2 IFI30 ENSG00000268030 GTPBP3 COMP UBA52 LRRC25 JUND FCHO1
GH19J018034 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 +4.6 4589 2.2 ZNF121 ZNF384 MAX TEAD1 MIER3 USF2 SMAD4 RARA NR2F6 TEAD3 LOC440514 LOC646666
GH19J018026 Enhancer 0.6 dbSUPER 0.7 -3.2 -3216 1.5 ZNF792 KLF9 PTBP1 BCOR ZNF16 ZNF664 KDM1A ZBTB7B ZMYM3 COMP LOC440514 ENSG00000273654
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC440514 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC440514 Gene

Genomic Locations for LOC440514 Gene
chr19:18,030,512-18,033,436
(GRCh38/hg38)
Size:
2,925 bases
Orientation:
Plus strand
chr19:18,133,212-18,144,246
(GRCh37/hg19)
Size:
11,035 bases
Orientation:
Plus strand

Genomic View for LOC440514 Gene

Genes around LOC440514 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC440514 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC440514 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC440514 Gene

Proteins for LOC440514 Gene

Post-translational modifications for LOC440514 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC440514 Gene

Domains & Families for LOC440514 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC440514 Gene

Function for LOC440514 Gene

Phenotypes From GWAS Catalog for LOC440514 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC440514 Gene

Localization for LOC440514 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC440514 Gene

Pathways & Interactions for LOC440514 Gene

PathCards logo

SuperPathways for LOC440514 Gene

No Data Available

Interacting Proteins for LOC440514 Gene

Gene Ontology (GO) - Biological Process for LOC440514 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC440514 Gene

Drugs & Compounds for LOC440514 Gene

No Compound Related Data Available

Transcripts for LOC440514 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC440514 Gene

No ASD Table

Relevant External Links for LOC440514 Gene

GeneLoc Exon Structure for
LOC440514

Expression for LOC440514 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC440514 Gene

mRNA expression in normal human tissues for LOC440514 Gene

mRNA differential expression in normal tissues according to GTEx for LOC440514 Gene

This gene is overexpressed in Muscle - Skeletal (x7.1) and Brain - Spinal cord (cervical c-1) (x4.4).
genes like me logo Genes that share expression patterns with LOC440514: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC440514 Gene

Orthologs for LOC440514 Gene

No data available for Orthologs and Evolution for LOC440514 Gene

Paralogs for LOC440514 Gene

No data available for Paralogs for LOC440514 Gene

Variants for LOC440514 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC440514 Gene

Disorders for LOC440514 Gene

No disorders were found for LOC440514 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC440514 Gene

Publications for LOC440514 Gene

No publications were found for LOC440514 Gene.

No data available for External Links for LOC440514 Gene

Products for LOC440514 Gene

Sources for LOC440514 Gene

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