Aliases for LOC402279 Gene

Aliases for LOC402279 Gene

  • Glutamate Metabotropic Receptor 8 Pseudogene 3
  • Pseudogene Similar To Part Of Glutamate Receptor, Metabotropic 8 GRM8 5
  • Glutamate Receptor, Metabotropic 8 Pseudogene 3
  • AC104057.1 5

External Ids for LOC402279 Gene

Previous GeneCards Identifiers for LOC402279 Gene

  • GC07P064493
  • GC07Ph64154
  • GC07Ph64155
  • GC07Ph64156
  • GC07Ph64157
  • GC07P064719
  • GC07P065083

Summaries for LOC402279 Gene

GeneCards Summary for LOC402279 Gene

LOC402279 (Glutamate Metabotropic Receptor 8 Pseudogene) is a Pseudogene.

Additional gene information for LOC402279 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC402279 Gene

Genomics for LOC402279 Gene

GeneHancer (GH) Regulatory Elements for LOC402279 Gene

Promoters and enhancers for LOC402279 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J065045 Enhancer 0.5 Ensembl 4.3 -571.1 -571081 1.2 BCOR ZNF639 KDM1A L3MBTL2 POLR2B ZNF184 ZNF24 HDAC2 SMARCA5 PRDM1 RF00017-6209 GTF2IP14 INTS4P1 ZNF117 CCT6P3 LOC402279 ENSG00000239985 lnc-ZNF273-4 lnc-ERV3-1-3
GH07J065613 Enhancer 0.4 Ensembl 0.7 -3.1 -3134 0.7 ZNF263 EZH2 ZNF512 LOC402279 RF00017-6211 piR-31890-037 LOC441242
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC402279 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC402279 Gene

Genomic Locations for LOC402279 Gene
chr7:65,617,082-65,619,154
(GRCh38/hg38)
Size:
2,073 bases
Orientation:
Plus strand
chr7:65,081,990-65,084,127
(GRCh37/hg19)
Size:
2,138 bases
Orientation:
Plus strand

Genomic View for LOC402279 Gene

Genes around LOC402279 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC402279 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC402279 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC402279 Gene

Proteins for LOC402279 Gene

Post-translational modifications for LOC402279 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC402279 Gene

Domains & Families for LOC402279 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC402279 Gene

Function for LOC402279 Gene

Phenotypes for LOC402279 Gene

genes like me logo Genes that share phenotypes with LOC402279: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC402279 Gene

Localization for LOC402279 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC402279 Gene

Pathways & Interactions for LOC402279 Gene

PathCards logo

SuperPathways for LOC402279 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC402279 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC402279 Gene

Drugs & Compounds for LOC402279 Gene

No Compound Related Data Available

Transcripts for LOC402279 Gene

mRNA/cDNA for LOC402279 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC402279 Gene

No ASD Table

Relevant External Links for LOC402279 Gene

GeneLoc Exon Structure for
LOC402279

Expression for LOC402279 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC402279 Gene

genes like me logo Genes that share expression patterns with LOC402279: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC402279 Gene

Orthologs for LOC402279 Gene

Evolution for LOC402279 Gene

ENSEMBL:
Gene Tree for LOC402279 (if available)
TreeFam:
Gene Tree for LOC402279 (if available)

No data available for Orthologs for LOC402279 Gene

Paralogs for LOC402279 Gene

No data available for Paralogs for LOC402279 Gene

Variants for LOC402279 Gene

Variation tolerance for LOC402279 Gene

Gene Damage Index Score: 2.91; 48.84% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for LOC402279 Gene

Disorders for LOC402279 Gene

No disorders were found for LOC402279 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC402279 Gene

Publications for LOC402279 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 54

No data available for Mastermind for LOC402279 Gene

Products for LOC402279 Gene

Sources for LOC402279 Gene