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Aliases for LOC401913 Gene

Aliases for LOC401913 Gene

  • ABO Blood Group (Transferase A, Alpha 1-3-N-Acetylgalactosaminyltransferase; Transferase B, Alpha 1-3-Galactosyltransferase) Pseudogene 3

External Ids for LOC401913 Gene

Previous GeneCards Identifiers for LOC401913 Gene

  • GC19P040035
  • GC19P040036
  • GC19P040049
  • GC19P035353
  • GC19P035357

Summaries for LOC401913 Gene

GeneCards Summary for LOC401913 Gene

LOC401913 (ABO Blood Group (Transferase A, Alpha 1-3-N-Acetylgalactosaminyltransferase; Transferase B, Alpha 1-3-Galactosyltransferase) Pseudogene) is a Pseudogene.

Additional gene information for LOC401913 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC401913 Gene

Genomics for LOC401913 Gene

GeneHancer (GH) Regulatory Elements for LOC401913 Gene

Promoters and enhancers for LOC401913 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J034867 Enhancer 0.3 Ensembl 600.7 +1.7 1650 0.4 PRDM10 GC19P037274 LOC401913 PIR35419 ENSG00000270624 ZNF30 ZNF599 ENSG00000269086 PIRC102 PIRC101
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC401913 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC401913 gene promoter:
  • SRF
  • SRF (504 AA)

Genomic Locations for LOC401913 Gene

Genomic Locations for LOC401913 Gene
chr19:34,866,351-34,866,911
(GRCh38/hg38)
Size:
561 bases
Orientation:
Plus strand
chr19:35,357,255-35,357,823
(GRCh37/hg19)
Size:
569 bases
Orientation:
Plus strand

Genomic View for LOC401913 Gene

Genes around LOC401913 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC401913 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC401913 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC401913 Gene

Proteins for LOC401913 Gene

Post-translational modifications for LOC401913 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC401913 Gene

Domains & Families for LOC401913 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC401913 Gene

Function for LOC401913 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC401913 Gene

Localization for LOC401913 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC401913 Gene

Pathways & Interactions for LOC401913 Gene

PathCards logo

SuperPathways for LOC401913 Gene

No Data Available

Interacting Proteins for LOC401913 Gene

Gene Ontology (GO) - Biological Process for LOC401913 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC401913 Gene

Drugs & Compounds for LOC401913 Gene

No Compound Related Data Available

Transcripts for LOC401913 Gene

mRNA/cDNA for LOC401913 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC401913 Gene

No ASD Table

Relevant External Links for LOC401913 Gene

GeneLoc Exon Structure for
LOC401913

Expression for LOC401913 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC401913 Gene

mRNA differential expression in normal tissues according to GTEx for LOC401913 Gene

This gene is overexpressed in Testis (x34.6).
genes like me logo Genes that share expression patterns with LOC401913: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC401913 Gene

Orthologs for LOC401913 Gene

No data available for Orthologs and Evolution for LOC401913 Gene

Paralogs for LOC401913 Gene

No data available for Paralogs for LOC401913 Gene

Variants for LOC401913 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC401913 Gene

Disorders for LOC401913 Gene

No disorders were found for LOC401913 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC401913 Gene

Publications for LOC401913 Gene

No publications were found for LOC401913 Gene.

No data available for External Links for LOC401913 Gene

Products for LOC401913 Gene

Sources for LOC401913 Gene

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