Aliases for LOC401324 Gene

Subcategory (RNA class) for LOC401324 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for LOC401324 Gene

  • Uncharacterized LOC401324 3
  • Hypothetical Gene Supported By AL832092 13
  • NONHSAG047330 94
  • Lnc-SEPT7-5 170

External Ids for LOC401324 Gene

Previous GeneCards Identifiers for LOC401324 Gene

  • GC07P035095
  • GC07P035126
  • GC07U901782
  • GC07P035355

Summaries for LOC401324 Gene

GeneCards Summary for LOC401324 Gene

LOC401324 (Uncharacterized LOC401324) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC401324 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC401324 Gene

Genomics for LOC401324 Gene

GeneHancer (GH) Regulatory Elements for LOC401324 Gene

Promoters and enhancers for LOC401324 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J035366 Enhancer 0.6 Ensembl ENCODE 0.2 +53.3 53346 2.8 SP1 USF1 BACH1 NANOG piR-43105-603 lnc-TBX20-2 ENSG00000287651 LOC401324
GH07J035354 Enhancer 0.5 Ensembl 0.3 +39.8 39846 0.2 MAFK PKNOX1 ZNF316 MAFG EMSY piR-43105-603 ENSG00000287651 LOC401324
GH07J035319 Enhancer 0.3 VISTA 0.4 +6.0 5964 0.9 POLR2A ENSG00000287651 LOC401324 piR-43105-603
GH07J035373 Enhancer 0.6 VISTA 0.2 +61.1 61072 3.6 LCORL NFIB NFIC lnc-TBX20-2 ENSG00000286526 ENSG00000287651 LOC401324
GH07J035348 Enhancer 0.2 VISTA 0.3 +35.2 35210 0.7 piR-43105-603 ENSG00000287651 LOC401324
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC401324 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC401324 Gene

Genomic Locations for LOC401324 Gene
chr7:35,313,855-35,377,030
(GRCh38/hg38)
Size:
63,176 bases
Orientation:
Plus strand
chr7:35,353,466-35,416,086
(GRCh37/hg19)
Size:
62,621 bases
Orientation:
Plus strand

Genomic View for LOC401324 Gene

Genes around LOC401324 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC401324 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC401324 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC401324 Gene

Proteins for LOC401324 Gene

  • Protein details for LOC401324 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A4D1Y7-A4D1Y7_HUMAN
    Recommended name:
    Hypothetical gene supported by AL832092
    Protein Accession:
    A4D1Y7

    Protein attributes for LOC401324 Gene

    Size:
    142 amino acids
    Molecular mass:
    15577 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LOC401324 Gene

Post-translational modifications for LOC401324 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC401324 Gene

Domains & Families for LOC401324 Gene

Protein Domains for LOC401324 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for LOC401324 Gene

GenScript: Design optimal peptide antigens:
  • Hypothetical gene supported by AL832092 (A4D1Y7_HUMAN)
genes like me logo Genes that share domains with LOC401324: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC401324 Gene

Function for LOC401324 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC401324 Gene

Localization for LOC401324 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC401324 Gene

Pathways & Interactions for LOC401324 Gene

PathCards logo

SuperPathways for LOC401324 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC401324 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC401324 Gene

Drugs & Compounds for LOC401324 Gene

No Compound Related Data Available

Transcripts for LOC401324 Gene

mRNA/cDNA for LOC401324 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) RNACentral transcripts :
(2) NONCODE transcripts :
(2) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC401324 Gene

No ASD Table

Relevant External Links for LOC401324 Gene

GeneLoc Exon Structure for
LOC401324

Expression for LOC401324 Gene

SOURCE GeneReport for Unigene cluster for LOC401324 Gene:

Hs.377034
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC401324 Gene

Orthologs for LOC401324 Gene

No data available for Orthologs and Evolution for LOC401324 Gene

Paralogs for LOC401324 Gene

No data available for Paralogs for LOC401324 Gene

Variants for LOC401324 Gene

Sequence variations from dbSNP and Humsavar for LOC401324 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000050750 -- 35,327,515(+) C/A intron_variant
rs1000066877 -- 35,348,368(+) G/A intron_variant
rs1000107299 -- 35,322,922(+) C/T intron_variant
rs1000192446 -- 35,370,456(+) C/G intron_variant
rs1000240717 -- 35,364,000(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC401324 Gene

Variant ID Type Subtype PubMed ID
esv999242 CNV deletion 20482838
nsv5696 CNV deletion 18451855
nsv830954 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC401324 Gene

Disorders for LOC401324 Gene

No disorders were found for LOC401324 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC401324 Gene

Publications for LOC401324 Gene

  1. Whole genome association scan for genetic polymorphisms influencing information processing speed. (PMID: 21130836) Luciano M … Deary IJ (Biological psychology 2011) 3 56
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 13 56

No data available for External Links for LOC401324 Gene

Products for LOC401324 Gene

Sources for LOC401324 Gene