Aliases for LOC401218 Gene

Aliases for LOC401218 Gene

  • Cyclin Q Pseudogene 3
  • Family With Sequence Similarity 58 Member A Pseudogene 3

External Ids for LOC401218 Gene

Previous GeneCards Identifiers for LOC401218 Gene

  • GC05M172171
  • GC05M172122
  • GC05M172190
  • GC05M172191

Summaries for LOC401218 Gene

GeneCards Summary for LOC401218 Gene

LOC401218 (Cyclin Q Pseudogene) is a Pseudogene.

Additional gene information for LOC401218 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC401218 Gene

Genomics for LOC401218 Gene

GeneHancer (GH) Regulatory Elements for LOC401218 Gene

Promoters and enhancers for LOC401218 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J172762 Enhancer 0.4 dbSUPER 500.7 +0.1 123 0.6 CREB1 SCRT1 ATF2 ATF7 SCRT2 ENSG00000213386 ENSG00000253736 LOC401218 lnc-ERGIC1-4 lnc-DUSP1-5
GH05J172761 Enhancer 0.2 Ensembl 500.7 +1.7 1650 0.2 ENSG00000213386 ENSG00000253736 LOC401218 lnc-DUSP1-5 lnc-NEURL1B-6 LOC101928093
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC401218 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC401218 gene promoter:
  • CREB
  • deltaCREB
  • Elk-1
  • GR
  • GR-alpha
  • GR-beta
  • Sp1

Genomic Locations for LOC401218 Gene

Genomic Locations for LOC401218 Gene
chr5:172,762,121-172,763,351
(GRCh38/hg38)
Size:
1,231 bases
Orientation:
Minus strand
chr5:172,189,520-172,190,261
(GRCh37/hg19)
Size:
742 bases
Orientation:
Minus strand

Genomic View for LOC401218 Gene

Genes around LOC401218 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC401218 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC401218 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC401218 Gene

Proteins for LOC401218 Gene

Post-translational modifications for LOC401218 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC401218 Gene

Domains & Families for LOC401218 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC401218 Gene

Function for LOC401218 Gene

Phenotypes for LOC401218 Gene

genes like me logo Genes that share phenotypes with LOC401218: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC401218 Gene

Localization for LOC401218 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC401218 Gene

Pathways & Interactions for LOC401218 Gene

PathCards logo

SuperPathways for LOC401218 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC401218 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC401218 Gene

Drugs & Compounds for LOC401218 Gene

No Compound Related Data Available

Transcripts for LOC401218 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC401218 Gene

No ASD Table

Relevant External Links for LOC401218 Gene

GeneLoc Exon Structure for
LOC401218

No data available for mRNA/cDNA for LOC401218 Gene

Expression for LOC401218 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC401218 Gene

mRNA expression in normal human tissues for LOC401218 Gene
genes like me logo Genes that share expression patterns with LOC401218: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC401218 Gene

Orthologs for LOC401218 Gene

No data available for Orthologs and Evolution for LOC401218 Gene

Paralogs for LOC401218 Gene

No data available for Paralogs for LOC401218 Gene

Variants for LOC401218 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC401218 Gene

Disorders for LOC401218 Gene

No disorders were found for LOC401218 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC401218 Gene

Publications for LOC401218 Gene

No publications were found for LOC401218 Gene.

No data available for Mastermind for LOC401218 Gene

Products for LOC401218 Gene

Sources for LOC401218 Gene