Aliases for LOC400750 Gene

Aliases for LOC400750 Gene

  • Heat Shock Protein Family A (Hsp70) Member 5 Pseudogene 3
  • Heat Shock 70kDa Protein 5 (Glucose-Regulated Protein, 78kDa) (HSPA5) Pseudogene 5
  • Heat Shock 70kDa Protein 5 (Glucose-Regulated Protein, 78kDa) Pseudogene 3
  • AL354702.1 5

External Ids for LOC400750 Gene

Previous GeneCards Identifiers for LOC400750 Gene

  • GC01P038328
  • GC01P038696
  • GC01P038947
  • GC01P039175

Summaries for LOC400750 Gene

GeneCards Summary for LOC400750 Gene

LOC400750 (Heat Shock Protein Family A (Hsp70) Member 5 Pseudogene) is a Pseudogene.

Additional gene information for LOC400750 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC400750 Gene

Genomics for LOC400750 Gene

GeneHancer (GH) Regulatory Elements for LOC400750 Gene

Promoters and enhancers for LOC400750 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J038708 Promoter 0.3 Ensembl 750.6 +0.1 71 0.4 LOC400750 RF00223-001 lnc-AKIRIN1-11 piR-61945-013 LOC105378660
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC400750 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC400750 gene promoter:
  • AhR
  • Arnt
  • C/EBPalpha
  • CHOP-10
  • Egr-2
  • Evi-1
  • ISGF-3
  • LUN-1
  • POU2F1
  • POU2F1a

Genomic Locations for LOC400750 Gene

Genomic Locations for LOC400750 Gene
chr1:38,708,930-38,710,890
(GRCh38/hg38)
Size:
1,961 bases
Orientation:
Plus strand
chr1:39,174,602-39,176,562
(GRCh37/hg19)
Size:
1,961 bases
Orientation:
Plus strand

Genomic View for LOC400750 Gene

Genes around LOC400750 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC400750 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC400750 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC400750 Gene

Proteins for LOC400750 Gene

Post-translational modifications for LOC400750 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC400750 Gene

Domains & Families for LOC400750 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC400750 Gene

Function for LOC400750 Gene

Phenotypes From GWAS Catalog for LOC400750 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC400750 Gene

Localization for LOC400750 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC400750 Gene

Pathways & Interactions for LOC400750 Gene

PathCards logo

SuperPathways for LOC400750 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC400750 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC400750 Gene

Drugs & Compounds for LOC400750 Gene

No Compound Related Data Available

Transcripts for LOC400750 Gene

mRNA/cDNA for LOC400750 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC400750 Gene

No ASD Table

Relevant External Links for LOC400750 Gene

GeneLoc Exon Structure for
LOC400750

Expression for LOC400750 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC400750 Gene

mRNA differential expression in normal tissues according to GTEx for LOC400750 Gene

This gene is overexpressed in Vagina (x5.3), Esophagus - Mucosa (x5.0), Bladder (x5.0), and Stomach (x4.8).
genes like me logo Genes that share expression patterns with LOC400750: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC400750 Gene

Orthologs for LOC400750 Gene

Evolution for LOC400750 Gene

ENSEMBL:
Gene Tree for LOC400750 (if available)
TreeFam:
Gene Tree for LOC400750 (if available)

No data available for Orthologs for LOC400750 Gene

Paralogs for LOC400750 Gene

No data available for Paralogs for LOC400750 Gene

Variants for LOC400750 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC400750 Gene

Disorders for LOC400750 Gene

No disorders were found for LOC400750 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC400750 Gene

Publications for LOC400750 Gene

  1. Genome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations. (PMID: 24529757) Xie T … Xu R (Neurobiology of aging 2014) 3 56
  2. Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women's Health Initiative SHARe Study. (PMID: 23192594) Velez Edwards DR … Edwards TL (Human genetics 2013) 3 56

No data available for External Links for LOC400750 Gene

Products for LOC400750 Gene

Sources for LOC400750 Gene